Entry |
|
Symbol |
uvrA
|
Name |
(GenBank) ATPase and DNA damage recognition protein of nucleotide excision repair excinuclease UvrABC
|
KO |
K03701 | excinuclease ABC subunit A |
|
Organism |
epo Endomicrobium proavitum
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Pathway |
|
Brite |
KEGG Orthology (KO) [BR:epo00001]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Epro_0747 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:epo03400]
Epro_0747 (uvrA)
DNA repair and recombination proteins [BR:epo03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Epro_0747 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Epro_0747 (uvrA)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(911593..914409)
|
AA seq |
938 aa
MDIIKIRGARQHNLKNIDLDIPRNKLVVVTGLSGSGKSSLAFDTIYAEGQRKYVESLSAY
ARQFLDLMEKPDADIIEGLSPAISIEQRNPSHNPRSTVGTVTEIYDYMRLLFARIGVPHC
PECGKEIKPQSAQQIIDEIMKFPDNTLVQILSPLVKARTGTYEELFARLAKSGYTRVRVD
KQIYSLEEKIKLDRYKKHTIDIVVGRIKISKDARLRVADSVETALKESKGLAIVTVSDKS
GKTISENVYSEKYACSDCAVSLLEIEPRLFSFNTPFGACPECGGLGNKIEVDENLVVPNK
ERSVKQGAIIAWSEPITTKTNRWKGSWGGYYWELLSQAAKENKIPTNVPWKDLTRNQQTI
LLYGKDDFEGVITNIKRRYTETESDFVKEEIYNKYMGVNICPLCKGKRLKKEALSVLIKG
KSIADITAMSIEKSQNFFAEINLGEKDKIISKTILKEIKERVKFLNNVGLGYLSLDRESG
TLSGGEGQRIHLATQIGSGLTGVLYVLDEPSIGLHQRDNDKLLETLLRLRDLGNSLIVVE
HDEDTMKVADHIIDLGPGAGVHGGHIIAEGSLKDVMNNKKSLTGRYLKGDIQIPLPKKRK
QPSDKWLTIEGAKQFNLKNVDVHIPIGLFTCVTGVSGSGKSTLVHEIIYKNLANKIYGSK
DLPGKFKSMDGVENIDKVVIVDQSPIGRTPRSNPATYTGSFGIIRDLFAQLPESKARGYL
PGRFSFNVKGGRCENCQGDGTLKIEMQFLPDVYVKCDVCDGKRFNEETLQIRYKGKNISE
ILEMTVEEGVKFFENFSTLNRILKTLDDVGLGYIKIGQQATTLSGGEAQRVKLAAELSKK
ATGRTIYILDEPTTGLHFADVGKLLEVLQRLTYAGNSVIVIEHNLDVIKTADWIVDLGPE
GGERGGKVVAEGSPEDIMKVKESFTGLYLKEHVRKHKL |
NT seq |
2817 nt +upstreamnt +downstreamnt
atggacataataaaaattcgcggggcgcggcagcataatttaaaaaatatagatttggat
attccgagaaacaaacttgttgtagttaccggtttgtcgggctcgggaaagtcgtcgctt
gcgtttgatactatttacgccgaggggcagagaaaatacgtagaatctttgtcggcttac
gcaaggcaatttttagaccttatggaaaagcccgacgcggatattatagaagggctttcg
cccgcaatatctattgaacagagaaacccgtcgcacaacccgcgttctaccgtaggaacc
gtaaccgaaatttacgattatatgagacttctgtttgcaagaatcggcgtgcctcattgc
cccgagtgcggcaaggaaattaaaccgcagtccgcgcagcagattatagacgaaataatg
aaatttccggacaacactctcgtgcaaattttgtcgcctcttgtaaaagcaagaaccggc
acttacgaagaactttttgcgcgtcttgcaaaaagcggatacacaagagtgcgcgttgat
aaacagatttattcgcttgaagaaaaaattaaattagacagatataaaaagcataccata
gacattgtggtaggcagaataaaaatttcaaaagacgcgcgcttaagagttgcggattcc
gtggagacggcgctcaaagaatcaaaaggtttagcgattgtaacggtttcggataaaagc
ggaaaaaccatttccgaaaacgtttacagcgagaaatacgcatgttctgactgcgcggta
agccttcttgaaatagagccgcgtcttttttcttttaacacgccctttggcgcgtgtccg
gagtgcggcggtttgggaaacaaaatagaagtggacgaaaatttagttgtcccaaacaaa
gagcgttccgtaaaacaaggcgcaattattgcttggtcggaacctattacaacaaaaacc
aacagatggaaaggctcgtggggcggatactattgggaacttttatcgcaggcggcaaaa
gaaaataaaattccaacaaacgttccgtggaaagatttaacgcgcaaccagcaaacaatt
cttctttacggaaaagacgattttgaaggcgtaataacaaacattaaacgcagatatacc
gaaacggaatccgactttgtaaaagaagaaatctataataaatacatgggcgttaatatc
tgccctttgtgcaagggaaaaaggcttaaaaaagaagctctttccgttttaattaaagga
aaatccatagccgatattacggcaatgtccattgaaaaatctcaaaacttttttgccgaa
atcaatcttggcgaaaaagataaaattataagtaaaacaattttaaaagaaataaaagag
agagttaaatttttaaataacgttgggctgggatatttaagtcttgacagagaaagcgga
actctttccggcggagaagggcagagaattcatcttgcaacgcaaataggttcggggctt
accggcgttctttacgtgttagacgaaccgtcaatagggcttcaccagagagacaacgat
aaacttcttgagactcttttaagattaagagatttgggaaactctttaatagtagtagag
catgacgaagacaccatgaaagttgccgatcatataatagatttaggtcccggcgcaggc
gttcacggcggacacataattgccgagggcagtttgaaagacgtaatgaacaataaaaaa
tctcttaccggacgttatcttaaaggcgatattcaaattccgctgcctaaaaaaagaaaa
cagccttcggataaatggcttacaatagaaggcgcaaaacagtttaatttaaaaaatgtt
gacgtccacattccgataggactttttacctgcgttaccggagtttccggcagcggtaaa
tctacgctggtgcacgaaataatttataaaaatctcgcaaacaaaatttacgggtcaaaa
gatttgcccggaaagtttaaaagcatggacggcgttgaaaatattgataaagttgtaatt
gtggatcagtctcccataggaagaacgccgcgctcaaacccagccacttacaccggctca
tttggaattataagagatttgttcgcgcagcttccggaatctaaagccagaggttatttg
cccggacgtttttctttcaacgttaaaggcggaagatgcgaaaattgtcagggcgacgga
actttgaaaatagagatgcagtttttacctgacgtttacgtaaaatgcgatgtctgcgac
ggaaaacgctttaatgaagagacgcttcagataagatataaaggtaaaaatatcagcgaa
attttagaaatgacggttgaagaaggcgtgaaattttttgagaatttttccacacttaac
agaattttaaaaacccttgacgacgtaggtttgggatatataaaaatagggcagcaagcc
acaacgttatctggcggcgaagcgcaaagagtaaaacttgccgcggaactttcaaaaaaa
gccaccggccgcacaatttatattcttgatgagccaactaccggacttcactttgccgac
gtcggcaaactgcttgaagttttgcagaggcttacatatgccggcaacagcgttattgta
atagagcataatttagacgtcataaaaaccgcggattggattgtagatttaggtcccgaa
ggcggcgagcgcggcggaaaagtagtagccgaaggttcgcctgaagatattatgaaagtt
aaagaatctttcacgggtctttatcttaaagaacacgtcagaaaacataagctttaa |