Endomicrobium proavitum: Epro_1020
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Entry
Epro_1020 CDS
T03965
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
epo
Endomicrobium proavitum
Pathway
epo03420
Nucleotide excision repair
epo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
epo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Epro_1020 (pcrA)
03430 Mismatch repair
Epro_1020 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
epo03400
]
Epro_1020 (pcrA)
Enzymes [BR:
epo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Epro_1020 (pcrA)
DNA repair and recombination proteins [BR:
epo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Epro_1020 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
Epro_1020 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
AAA_12
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
AKL98399
UniProt:
A0A0G3WLL9
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All DBs
Position
1217230..1219488
Genome browser
AA seq
752 aa
AA seq
DB search
MDNSLFDNLNQSQKDAVLCTEGPLIIFAGAGTGKTRVITHRIAHLLSKGVKPWQILAVTF
TNKAAGEMKKRVNDLAPGAGANVSVSTFHSFCAYFLRVEASKINLNPDFLIYDFADQKNV
VKDCLKELNIDEKKYKPSTVVDRISRAKDDLKFPSDMAADAQANGDFFGTTIAKAYALYQ
KKLELASALDFGDLIMRVVVALRQYPALLEHYQQKYKYILVDEYQDTNHAQYVLTKLLAQ
KHQNICVVGDDDQSVYSWRGADITNILDFEKDYPSAKSVKLEQNYRSTPKILETAYKVVK
NNQGRIEKKLWTQNADDGGVSVVKSANENEEAARVVDLITINSQNEKYNLSDFAVFYRTN
AQSRVFEDAFRRAGMSYAVIGTLRFYDRAEIKDIMAYLKLIHNPNDNVSFKRVINVPRRG
IGKTSMENLEKFAGGQGLSIWQTLDRANEAGINKGAINALNAFAEFIKAFMHLKETESVK
EIAQKIITHSGYLKELEDENTPESKTKIENIQELISAIEDFEQRSPDNKTLSDYLTQIAL
ISDTDSLDDSNGKVTLMTLHLAKGLEFDNVFICGLEEGLFPIGESAFNPEELEEERRLMY
VGMTRARKHLYLCWASERTVYGKTRWNMASRFITEAGFKDEFTQSPEPKPFFNRGFNRAK
WNATSKTEPKYQKDDTYDYIPSDDDIIKDEPLYTPVSDNSPYKIGALVRHPVFGNGKIIE
KTGAGNDVKLVVLFENGQWKKLLARVANLTLV
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atggacaattccctgtttgacaatctaaatcagtcgcaaaaagacgcggttttgtgcacc
gaagggcccctcataatttttgcgggcgcgggcacgggcaaaacgcgcgttataacgcac
cgcatagcgcatttgctttctaaaggcgttaaaccctggcaaattcttgcggtaactttt
accaacaaagccgccggagaaatgaaaaaacgcgttaacgatttagcgccgggcgcaggc
gcaaacgtttcagtttctacgtttcactctttctgcgcgtattttttgcgcgttgaagcg
tcaaaaataaatttgaacccggattttttaatatacgattttgccgaccaaaaaaacgtg
gttaaagactgtttaaaagaattaaatattgacgaaaaaaaatacaaaccttccaccgtt
gtggacagaatcagccgagcaaaagacgatttaaaatttccctccgatatggctgccgat
gcgcaagccaacggcgattttttcggcacaacaattgcaaaagcttacgcgctatatcaa
aaaaaattagagctcgcttccgcgttagattttggcgatttaattatgcgcgtagttgta
gctttgcggcaatatcccgcgcttcttgaacattaccagcaaaaatacaaatacattttg
gttgacgaatatcaagacacaaatcacgcgcaatacgttttaacaaaactccttgcgcaa
aaacatcaaaacatatgcgtagtcggagatgacgatcaaagcgtttacagctggcgcggc
gcggatattacaaatattttagattttgagaaagattatccttcggcaaaatccgttaag
cttgaacagaattaccgctcaacgccgaagattttagaaacggcttataaagttgttaaa
aataatcagggacgcatagagaaaaaactttggacgcaaaatgcggatgacggcggcgta
tcggttgtaaaatccgcaaatgaaaacgaagaggcggcgagggttgtggatttaataaca
attaattcgcaaaacgaaaaatataatttatcggactttgcggttttttaccgcaccaat
gcgcaaagccgcgtgtttgaagacgcgttcagaagagccggaatgtcttacgctgttata
ggtactctgcgattttacgaccgcgcggaaattaaagacattatggcttacttaaaatta
attcataaccccaacgacaacgtaagttttaaaagagttataaacgttccgcgacgcggg
ataggcaaaacttcaatggaaaatttagaaaaatttgccggcggacaaggcttatcaatt
tggcagacgttagaccgcgcaaacgaagcgggcatcaacaaaggcgcaataaacgcgctc
aacgcttttgcggaatttataaaagctttcatgcatttaaaagaaacggaaagcgtaaaa
gaaattgcgcaaaaaattataacgcattccggctatctcaaagaacttgaagacgaaaac
actccggaatctaaaacaaaaatagaaaatattcaggaattaatttccgcaatagaagat
tttgagcagcgctcccccgacaacaaaactctttcggattatttaacgcaaatagctttg
ataagcgacactgattctttggacgattccaacggcaaagtaactcttatgacgctgcac
cttgcaaaaggtttggagtttgacaatgtgtttatatgcgggcttgaagaaggacttttt
cctatcggggaatccgcatttaaccccgaagaacttgaagaagaaagaagattaatgtat
gtaggcatgacaagagccagaaaacatttatatttatgctgggcgtccgaaagaacggtt
tacggaaaaaccagatggaatatggcgtcgcgctttattaccgaagcaggctttaaagac
gagtttacgcaaagtccggaaccaaaaccgttttttaaccgcggttttaacagagcaaaa
tggaacgctacttcaaaaacagagccgaaatatcaaaaagacgatacttacgattacatt
ccttccgacgacgatatcataaaagacgaaccgctttatacgccggtttccgacaacagc
ccttataaaataggcgcgcttgtgcgccaccctgtttttggaaacggaaaaattatagaa
aaaaccggcgccggcaacgacgtaaaacttgtcgttttatttgaaaacggccagtggaaa
aaacttcttgcaagagttgcaaatttaactttggtttaa
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