Endomicrobium proavitum: Epro_1067
Help
Entry
Epro_1067 CDS
T03965
Symbol
recQ
Name
(GenBank) putative ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
epo
Endomicrobium proavitum
Pathway
epo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
epo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Epro_1067 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
epo03019
]
Epro_1067 (recQ)
03400 DNA repair and recombination proteins [BR:
epo03400
]
Epro_1067 (recQ)
Enzymes [BR:
epo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Epro_1067 (recQ)
Messenger RNA biogenesis [BR:
epo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Epro_1067 (recQ)
DNA repair and recombination proteins [BR:
epo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Epro_1067 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
Helicase_C
DEAD
HRDC
RecQ_Zn_bind
Helicase_Sgs1
ResIII
Cas3-like_C_2
RecO_C
Motif
Other DBs
NCBI-ProteinID:
AKL98446
UniProt:
A0A0G3WII3
LinkDB
All DBs
Position
complement(1282712..1284568)
Genome browser
AA seq
618 aa
AA seq
DB search
MTTNFAEQKLQVLKEYFGHQSFRSVQEELIDATLAGRDALGIMPTGAGKSVCFQVPAVLF
DGITIVISPLISLMKDQTASLTQNGIKSAYINSSLTPAQTKKILDNALAGEYKLIYIAPE
RLDYDGFLNFTRKIKISMVTIDEAHCVSQWGQDFRPSYTKIAGFVSGINPRPIVSAFTAT
ATPRVRKDIVDILELNAPQISVASFDRANLKFDVRHPVKKFNELIEILKDKKDKSGIIYC
LTRKTVDDLTEKLKAAGFNAASYHAGLTTKQRHANQDDFIFDRVNIIVATNAFGMGIDKS
NVSFVIHYNMPKDIESYYQEAGRAGRDGSPADCIVLYSGQDIMTNLFLINNSDGREYETP
EDELYLKSLERERLKEMDQYCNTNECLRHYILKYFGEIPSWNECANCGNCNAESKMEDIT
ILSQKILSCVVRMQGNFGKNFVMDVLRGSKAEKIISFGFNKLSTYGICAESKEKLKDVIN
FLTINKFLATTNTEFPVLKLGARAAEILKDKIKVEMKVSTAQKVEAADIVSKYKDKPDKN
IVINKELFEALKRLRQTIAAQQNVPAYIIFPNTALIDMCGKLPKTKEEFSQISGVGSQKL
EKYGDIFVKTIIEFLNGR
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
ttgacaacgaatttcgcagaacaaaaattacaagttcttaaagaatatttcgggcatcaa
tcttttcgcagcgtgcaggaagaacttattgacgcaacgcttgccggccgcgatgcgctg
ggcattatgcctaccggcgcgggcaaatccgtttgttttcaggtgccggccgttttgttt
gacggcataacaattgtaatttctccgcttatttctcttatgaaagatcaaaccgcgtcg
cttacgcaaaacggtataaaatccgcatatatcaacagttccctcacgccagcccaaacc
aaaaaaattcttgataacgcgcttgccggcgaatataaacttatttatattgctcccgag
cggttagattacgacgggtttttaaattttacaagaaaaattaaaatttctatggtaaca
atagacgaagctcactgcgtgtctcagtggggtcaggattttcgtccaagttacacaaaa
atagcgggttttgtcagcggaattaatccgcgccctatagtttctgcgtttaccgccaca
gccaccccgcgcgttagaaaagatattgttgatattttagaattaaacgcgccgcaaatt
tccgttgcaagttttgacagggcaaatttaaaatttgacgttcgtcatcccgtaaaaaaa
tttaacgagttaatagaaatattaaaagataaaaaagataagtccggaataatttattgt
ttaacaagaaaaacggttgacgaccttaccgaaaaattaaaagccgcgggttttaacgcg
gcaagttatcacgcggggcttaccacaaaacagcgccacgcaaatcaggacgattttatt
tttgaccgcgtaaacataatagttgccacaaatgcgttcggcatgggaatagataaatcc
aatgtttcgtttgttatccattacaacatgccaaaagatatagaaagttactatcaggaa
gccggcagagcaggccgcgacggctcgcccgcagactgcattgttttatacagcggtcaa
gacataatgacaaatctttttttaataaataacagcgacggcagagaatacgaaacgccg
gaagacgaattatatttaaaatcgctggaacgcgaacgcttaaaagaaatggatcaatac
tgcaacacaaacgaatgccttcgccattatattctaaaatatttcggcgaaattccatct
tggaacgaatgcgcaaattgcggcaactgcaacgcggaatctaaaatggaagatataaca
attttatcgcaaaaaatattgtcgtgcgttgtccgaatgcagggaaatttcggcaaaaat
tttgttatggacgtattaagaggcagtaaagccgaaaaaattataagttttgggtttaat
aaactttctacttacggcatttgcgctgaaagcaaagaaaaactaaaagacgtaattaat
tttcttacaataaataaatttttagccacaacaaatacggaatttcccgttttaaaatta
ggcgcccgcgcagcggaaattttaaaagataaaattaaagtagaaatgaaagtatcaaca
gctcaaaaagttgaagcggctgatatagtatctaaatataaagataaacccgataaaaat
attgtaataaacaaagagttgtttgaagcgttaaaacggttaagacaaacaatagccgcg
caacaaaatgtgccggcgtatataatttttccaaacacggctttaatagatatgtgcggt
aaacttccaaaaactaaagaagagttttcacaaatatcgggcgtaggctcccaaaaactt
gaaaaatacggcgacatttttgtaaaaacaattattgagtttttaaacggcaggtga
DBGET
integrated database retrieval system
