Erwinia pyrifoliae DSM 12163: EPYR_00024
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Entry
EPYR_00024 CDS
T02121
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
epr
Erwinia pyrifoliae DSM 12163
Pathway
epr03030
DNA replication
epr03410
Base excision repair
epr03420
Nucleotide excision repair
epr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
epr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EPYR_00024 (polA)
03410 Base excision repair
EPYR_00024 (polA)
03420 Nucleotide excision repair
EPYR_00024 (polA)
03440 Homologous recombination
EPYR_00024 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
epr03032
]
EPYR_00024 (polA)
03400 DNA repair and recombination proteins [BR:
epr03400
]
EPYR_00024 (polA)
Enzymes [BR:
epr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EPYR_00024 (polA)
DNA replication proteins [BR:
epr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
EPYR_00024 (polA)
DNA repair and recombination proteins [BR:
epr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
EPYR_00024 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EPYR_00024 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
CAY72303
LinkDB
All DBs
Position
41641..44430
Genome browser
AA seq
929 aa
AA seq
DB search
MAQIAENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLLLQYKPSHVAV
VFDAKGKTFRDELFDAYKSHRPPMPDDLRAQIEPLHKMVKAMGLPLLAISGVEADDVIGT
LALEAEKAGRAVLISTGDKDMAQLVTPDITLINTMNNAILGPDEVVEKYGIPPSLMIDFL
ALMGDSSDNIPGVAGVGEKTAQALLQGLGGVKEIYDNLDKVATLTFRGAKTMAARLEQNK
EMALLSYQLATIKTDVELELTSDQLTVEEPAVEELLALFKHYEFKRWITDLEDGKWLQGN
KGSPSTKKKAAVQNEPAVAEATSMLSSDGYVTILDEDTFTSWLKKLQDSELFAFDLETDS
LDTLSANIIGLSFATAPGEAAYLPVAHDYLDAPEQLDRSDVLARLKPLLEDPQAQKVGQN
LKFDRGVLKRYDIELQGIRFDTMLESYALNSVAGRHDMDTLASRWLNHKTVTFEEIAGKG
KNQLTFNQIALEQAAHYAAEDADVTLQLHVKMWPELEKEQGPKNVFEQVEMPLVPVISRI
ERNGVLIDPGILATHSQELGSRLAELELKAHELAGEPFNLSSPKQLQTILFEKQGIKPTK
KTPGGAPSTSEEVLAELALDYPLPKVILEHRGLAKLKSTYTDKLPLMINPHSGRVHTSYH
QTVTATGRLSSSDPNLQNIPVRNDEGRRIRQAFIAPQGHRIVAADYSQIELRIMAHLSQD
KGLLSAFASEQDIHRATAAEVFGVSLDKVSGEQRRSAKAINFGLIYGMSAFGLSRQLNIG
AGEAKKYMDLYFERYPGVLQYMESTRELAAQKGYVSTLDGRRLYLPDIKASNAMRRKAAE
RAAINAPMQGTAADIIKRAMIAVDRWLEQQPSPEVKMIMQVHDELVFEVHADAVEAACAQ
IRALMEGSMKLDVPLRVDIGVGDNWDQAH
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaattgcagaaaacccgctgattttggtagatggctcttcctacctgtatcgt
gcttatcacgcgtttcctccgctgactaatagcgcgggtgaacccaccggtgcaatgtac
ggcgtattaaatatgcttcgcagcctgctgttgcaatataagccaagtcatgtcgctgtg
gtttttgatgccaagggtaaaacgttccgcgacgaactgtttgatgcgtataaatcccac
cgtccccccatgcctgacgatctgcgcgcgcagattgagccgttacacaaaatggttaaa
gcgatggggctgcctctgctggccatctccggcgttgaagctgatgacgtaatcggcacg
ctggcgcttgaagccgagaaagcagggcgcgcggtattgatcagcaccggtgataaagat
atggctcagctggtcacgcctgatatcacgctgatcaacaccatgaataacgcgattctc
ggccctgatgaagtggttgagaaatacggcatcccaccctcgttgatgattgatttcctt
gccctgatgggtgactcctctgacaacatccccggtgttgctggcgtgggtgagaaaacg
gcgcaggcgctgcttcaggggttgggcggcgtgaaagagatttacgataacctggacaaa
gtggcgacgctgacattccggggtgccaaaacgatggccgccaggctggagcaaaataaa
gagatggcactcctctcttatcagctggcgacgattaaaacggacgttgaacttgaactg
accagcgaccagctaacggtggaagaaccggcggtagaggagctgctggcgctattcaag
cattacgagttcaagcgctggattaccgatcttgaagacggcaagtggttgcagggtaat
aaaggtagcccgtcaacgaaaaaaaaggcggcggtgcaaaacgaaccggcagtggcagaa
gcgaccagcatgctttcctcagacggctatgtcaccatccttgacgaagacacgttcacc
agctggttgaaaaaattacaggacagcgaactgtttgctttcgatctggaaacggattct
ctggacacgcttagcgctaatatcatcggcctttcatttgcgactgcgcctggtgaggcc
gcctatctgccggtcgctcatgactatcttgatgcacccgaacagctggatcgcagcgat
gtgcttgcgcgccttaagccactgctggaagacccgcaggcacagaaagttgggcagaac
cttaagttcgatcgcggcgtgctaaagcgttatgacatcgaattacaggggatccgcttt
gataccatgctggaatcctacgcgctgaacagcgtggccggtcgccatgatatggatacg
ctggcatcgcgctggttaaatcataagaccgtcacttttgaagaaatagccggcaaaggt
aagaatcagctaactttcaaccaaattgcgctggagcaggcggcgcactatgcagcagaa
gatgccgacgtaacgctacagctgcatgtgaaaatgtggccggagctggaaaaagaacag
ggacctaaaaacgtctttgaacaggtcgaaatgccgctggtgccggtcatttcacgtata
gaacgtaatggggtgctgatcgacccgggtattttggccacgcattcgcaggagctgggc
agccgcctggcggagctggagctgaaagcgcatgaactggcaggcgagccgttcaacctt
tcatcaccgaaacagctgcaaaccatcctgttcgaaaagcagggtattaagcccaccaaa
aaaacccctggcggtgcgccctctaccagtgaagaagtgctggctgaactggcgctggat
tacccgttaccgaaggtaattctggagcatcgcggccttgccaaactaaaatcgacctat
accgacaagctgccgctgatgatcaatccgcatagcggacgggtacatacatcttatcac
cagacggtaactgcaaccgggcgtctctcttccagcgatcccaacctgcaaaacatcccg
gtacgcaatgatgaaggtcgtcgcattcgccaggcatttattgcgccgcaaggccatcgt
atcgtggcggcggactactcgcagattgagctgcgcatcatggcgcacctgtcacaggat
aaaggactgctatcggcctttgccagcgaacaggatattcaccgtgccacggcggcagaa
gtgttcggcgtgtcgctggacaaggtcagcggagagcagcgccgtagcgccaaggcaatt
aactttggtctgatttacggtatgagcgcttttggtttgtcgcgtcagctaaatattggc
gcaggagaagcgaagaagtatatggatctttattttgagcgctatccgggggttctgcaa
tacatggaaagtactcgcgagctggcggcgcagaaaggctatgtatcgacgctggacggt
cgccgtctgtacctgccggatatcaaagccagtaatgccatgcgccgtaaggcggccgag
cgtgcggcaatcaatgccccgatgcagggtaccgcagcggatatcatcaagcgtgccatg
attgccgtagatcgctggctggagcagcagccatcccctgaagtcaaaatgattatgcag
gtgcacgatgagttggtgtttgaagtgcatgcggatgcggtagaagcggcttgcgcgcag
atccgtgcgttgatggaggggagcatgaagctggatgtgccgttgcgcgtagatattggc
gtaggtgacaactgggaccaggctcactaa
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