Erwinia pyrifoliae DSM 12163: EPYR_00217
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Entry
EPYR_00217 CDS
T02121
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
epr
Erwinia pyrifoliae DSM 12163
Pathway
epr03420
Nucleotide excision repair
epr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
epr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EPYR_00217 (uvrD)
03430 Mismatch repair
EPYR_00217 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
epr03400
]
EPYR_00217 (uvrD)
Enzymes [BR:
epr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EPYR_00217 (uvrD)
DNA repair and recombination proteins [BR:
epr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EPYR_00217 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
EPYR_00217 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
AAA_30
UvrD_C_2
AAA_11
AAA_22
PhoH
Motif
Other DBs
NCBI-ProteinID:
CAY72510
LinkDB
All DBs
Position
238936..241107
Genome browser
AA seq
723 aa
AA seq
DB search
MVPMDVSDLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMGVENCSPHSI
MAVTFTNKAAAEMRHRIEQLIGTSQGGMWIGTFHGLAHRLLRAHHLDANLPQDFQILDSE
DQLRLLKRLIKAMNLDEKQWPARQGMWYINGKKDEGLRLKHIESYGNPIEQTWLRIYQAY
QEACDRAGLVDFAELLLRAHELWLNKPHILNHYRERFTNILVDEFQDTNNIQYAWIRMLA
GDTGKVIIVGDDDQSIYGWRGAQVENIQRFLQDFPAAETIRLEQNYRSTNNILKAANTLI
ANNNGRLGKELWTEDSDGEPIAIYCAFNELDEARFVVNRIKVWMEKGGALNDCAILYRSN
AQSRVLEEALLQTSMPYRIYGGMRFFERQEIKDSLAYLRLISNRNDDAAFERVVNTPTRG
IGDRTLDVVRQTARERQLTLWQTARALLQEKALAGRAASALQRFTELVDSLAHETSDMPL
HVQTDRVIKDSGLWLMYEQEKGEKGQARIENLEELVNATRQYSYQDEDEDLMPLQAFLSH
AALEAGEGQADKWQDAVQLMTMHAAKGLEFMQVFIVGMEEGMFPSQMSLEEGGRLEEERR
LAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPVECVEEVRLRASISRPVSHQ
RMGAPVAKNDSGFTLGQRVHHAKFGEGTIVNLEGSGEHSRLQVAFQGQGIKWLVAAYAKL
EAM
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggtgcctatggacgtttctgacctgctcgatagcttgaatgacaaacaacgtgaggcc
gtggccgcaccgcgcagtaatctgctggtactggccggagcgggcagtggcaaaacgcgc
gtactggtgcatcgtatcgcctggctgatgggagtagaaaactgttctcctcactcgatc
atggcggtgaccttcaccaataaggcggcggcggaaatgcgccatcgtatcgaacagctg
atcggcaccagccagggcggaatgtggatcggcaccttccacggccttgcgcaccgtcta
ctgcgtgcgcaccatctggatgccaacctgccgcaggacttccagatcctcgacagtgaa
gaccagctgcgcctgctgaaacgcctgattaaggcaatgaatctggatgagaagcagtgg
ccggcccgtcaggggatgtggtacatcaacggcaagaaagacgaagggctgcgcctgaag
catatcgaaagctacggcaacccgattgagcaaacctggctgcgtatttaccaggcctat
caggaagcgtgcgatcgcgccggactggtggacttcgccgagctgctgctgcgtgcgcac
gagctgtggctgaataaaccgcatatccttaaccactatcgtgaaaggtttaccaacatc
ctggtggacgaattccaggataccaacaatatccagtacgcctggatccgtatgctggcc
ggtgatacggggaaagtgattatcgtcggtgacgacgatcagtcgatctacggctggcgt
ggggcgcaggtggagaatattcagcgcttcctgcaggacttcccggcggcagaaaccatt
cgccttgagcagaactatcgttcgaccaacaatatcctgaaagcggcgaataccctgatt
gccaacaacaacggtcgcctgggtaaggagctgtggactgaagacagcgacggcgagcca
atcgcgatttactgcgcctttaacgagctggatgaagcgcgttttgtggttaatcgcatc
aaggtatggatggagaaaggcggcgcgctgaatgactgcgctatcctgtaccgcagcaac
gcccagtcgcgcgtgctggaagaagcgctgttacaaaccagcatgccgtaccgtatttat
ggcggtatgcgcttcttcgaacgccaggaaatcaaggattccctcgcctatctgcgcctg
atctctaaccgcaatgacgatgcggcctttgagcgcgtggtgaataccccgacgcgtggc
atcggcgaccgcacgcttgatgtggttcgccagacggcgcgtgagcgccagctgacctta
tggcaaaccgcccgcgcgctgttgcaggaaaaagcgctggccgggcgtgcggcttccgct
ctgcaacgcttcaccgaactggtggactcgctggcgcacgaaaccagcgacatgccgctg
cacgttcagacggatcgggtgatcaaagactccggcctgtggctgatgtacgagcaggag
aaaggcgagaagggccaggcgcgaattgaaaaccttgaagaactggtcaatgccacccgc
cagtacagctatcaggatgaggatgaagacctgatgccgctgcaggcattcttgtctcat
gccgcgctggaagcgggggaaggccaggccgataagtggcaggatgccgtgcagctgatg
accatgcacgccgcgaaaggccttgaatttatgcaggtatttatcgtcggcatggaagaa
ggcatgtttcccagccagatgtcgcttgaagagggcggacggctggaagaagagcgccgt
cttgcctatgttggcgtgacgcgggcgatgcaaaaactgacgttgacctacgccgaaaca
cggcggctgtacggcaaggaggtctatcaccggccgtcgcgctttataggcgaactgccg
gtggagtgcgtggaagaggtgcggctgcgcgccagcatcagtcggccggtcagtcatcag
cgcatgggcgcgccggtggcgaaaaatgacagcggttttaccctcggccagcgggtacat
catgcgaaatttggcgaagggaccattgttaaccttgaaggtagcggtgaacacagccgt
ttgcaggtggcgtttcagggccagggcattaagtggctggtcgccgcgtatgccaaactg
gaagcgatgtga
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