Erwinia pyrifoliae DSM 12163: EPYR_00299
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Entry
EPYR_00299 CDS
T02121
Symbol
yhdA
Name
(GenBank) Uncharacterized protein yhdA
KO
K18765
RNase E specificity factor CsrD
Organism
epr
Erwinia pyrifoliae DSM 12163
Brite
KEGG Orthology (KO) [BR:
epr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
epr03019
]
EPYR_00299 (yhdA)
Messenger RNA biogenesis [BR:
epr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
EPYR_00299 (yhdA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
GAPES4
GDPD
MukE
Motif
Other DBs
NCBI-ProteinID:
CAY72601
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Position
343063..345012
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AA seq
649 aa
AA seq
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MRLTTKLSAIVTLLSSLAMLLMLVGCVLSFFYLSNQRAEYRVQLMADEVDSALFAQTPAQ
IESWLRQVMNPLRIEHIELSQDNRPLLKVTRHQRPLLQDEPNRYRQTVLPLTQHTDMALR
IQWVDSTRTWFTSLIGASSLSAIIGVVVIMMLLLLQAHRWLYRQLQGMERLEARAGAVIN
GDRATVRPGSVHEWPPKASSAIDLLLSDLKEAGEQHNRIDTLIRAFAAQDARTGLNNRLF
FDNQLTTLLEDPEAVGTHGMVMMIRLPDFDTLRERWGHAEVQEYLFALVNMLSTFVLRYP
GALLARYFRSDFAVLLPHRSVKDADSIASQLITAVDSLPSTRMVDRDDIIYIGISGWHSG
QSTQQVMENVELATRQAMLQGGNNWSVGEGGQQDLTRGSVKWRTLLENTVNQGGPRLYQK
PAVNGLGEVHHREILPRIYDGEKELLSAEYLPMVQQLGLAERYDRLLVKRVVTLTEWWPE
ETLAIPLTLDSLLQRSFLRWLRDSLLQCTQSQRKRILFELAEADVCQHINRLAPVFRLLY
GFGCSVAVNQAGLTVVSTAYIKQFQIRLIKLHPGLVRSIDKRTENQLFVQSLLESCRQTG
AEVFAAGVHSREEWQTLAELGVTGGQGDFFAASQSVNTSVKKYSQRYRV
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgcgattaaccaccaagctttctgcaattgttaccctgctcagttcactggcgatgttg
ttgatgttggtcggctgcgtgctgagcttcttctatcttagcaaccagcgggcagagtat
cgggttcagctgatggctgatgaagttgatagcgcattatttgctcagacgcccgcacag
atcgaatcctggctgcgccaggtgatgaatccgttgcgcatagaacatatcgaactatcc
caggataaccggccgctgcttaaggtcactcgccatcagcgcccgctgttgcaggatgag
cctaatcgttatcgtcaaaccgtgctgccgctgactcaacatacggatatggctttacgt
atccagtgggtcgattccacccgtacctggtttacctctttgattggtgcctccagtctg
tcggcgattatcggcgtggtggtgattatgatgctgctgctgttgcaggcgcatcgctgg
ctctaccgacaattgcagggaatggagcgtctggaagcgcgcgccggggcggtgatcaac
ggtgacagagccaccgtcaggccgggttcggtacatgaatggccgccaaaagccagtagc
gccatcgatttgctgctgtcggatttaaaagaggcgggagagcagcataaccgcatcgac
acgctaatccgggccttcgccgcgcaagatgcgcgtaccggcctgaataaccgcctgttt
tttgataatcaactgactaccctgttagaagacccggaagcggtaggcacgcacgggatg
gtgatgatgatccgactgccggattttgacaccctgcgcgaacgctgggggcatgccgag
gtacaggaatatctgtttgccctggtcaacatgctgtcaacctttgttttgcgttacccc
ggtgcgcttctggcgcgctatttccgcagcgactttgccgtcctgctgccgcatcgcagc
gtgaaagacgcggatagcatcgcctcacagttgatcaccgcagtagacagcctgccgtcg
acgcggatggtggatcgtgatgacattatctatattggtatcagcggctggcacagcggg
caaagtacgcaacaggtgatggaaaacgtcgaactggcgacgcgccaggccatgctgcag
ggcggtaataactggtcagtcggtgagggcggccaacaggatctgacgcgcggtagcgtt
aaatggcgcactttgctggagaataccgtcaatcagggcggcccgcgcctgtaccagaag
ccggccgttaatggcctgggtgaagtccatcatcgtgaaattttgccgcgtatctatgac
ggagaaaaagagctgctgtcggccgaatatctgcctatggtgcagcaactcggtctggca
gaacgctatgaccgcctgctggtaaaacgcgtcgtcacgctgactgaatggtggccggaa
gaaacgctggccattccactgactcttgactccctgttgcaacgctctttcctgcgctgg
ctgcgggatagcctgttgcaatgcactcaatcgcaaagaaaacgtattttgtttgaactt
gcggaagccgatgtgtgtcaacacatcaatcgcctggctcccgtctttcgtttgctttac
ggttttggttgtagcgtggcggtcaatcaggcgggtctgacggtcgtgagcactgcctat
atcaaacagttccagattcggctgattaaactgcatccgggcctggtgcgcagtattgac
aagcgcaccgaaaatcagctgtttgtccaaagccttcttgagagctgccggcaaacgggc
gctgaggtttttgctgcaggagtccattcaagggaagagtggcaaacgctggcagagctg
ggcgttaccggggggcagggagactttttcgccgcgtcccaatcagttaacaccagcgta
aaaaaatattcgcaaagatatcgagtttag
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