Erwinia pyrifoliae DSM 12163: EPYR_00378
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Entry
EPYR_00378 CDS
T02121
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
epr
Erwinia pyrifoliae DSM 12163
Pathway
epr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
epr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EPYR_00378 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
epr03019
]
EPYR_00378 (pnp)
03016 Transfer RNA biogenesis [BR:
epr03016
]
EPYR_00378 (pnp)
Enzymes [BR:
epr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
EPYR_00378 (pnp)
Messenger RNA biogenesis [BR:
epr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
EPYR_00378 (pnp)
Transfer RNA biogenesis [BR:
epr03016
]
Prokaryotic type
tRNA degradation factors
EPYR_00378 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_2
aRib
OB_RRP5_4th
KH_2
S1_RRP5
KH-I_KHDC4-BBP
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
CAY72680
LinkDB
All DBs
Position
433385..435601
Genome browser
AA seq
738 aa
AA seq
DB search
MSLVARMQNEDLKPTAGKNTRPDVKELTLLNPIVKKFQYGQHTVTLETGMMARQATAAVM
VSMDDTAVFVTVVGQKKSKPGQDFFPLTVNYQERTYAAGRIPGSFFRREGRPSEGETLTS
RLIDRPIRPLFPEGFVNEVQVIATVVSVNPQVNPDIVAMIGASAALALSGLPFNGPIGAA
RVGYLNDQYVLNPTSDELKESKLDLVVAGTKGAVLMVESEAELLSEEQMLGAVVFGHDQQ
QIVIDNINALVAEAGKPRWDWQPEAVNEALRSRIAALAESRLSDAYRITEKQERYAQVDV
IKSETTAALLAEDEALDAGEISDLLHALEKDVVRSRILRGEPRIDGREKDMIRGLDVRTG
VLPRTHGSALFTRGETQALVTATLGTARDAQNLDELMGERTDNFLFHYNFPPYSVGETGM
VGSPKRREIGHGRLAKRGVLAVMPKGDAFPYTVRVVSEITESNGSSSMASVCGASLALMD
AGVPIKAAVAGIAMGLVKDDNNFVVLSDILGDEDHLGDMDFKVAGSREGITALQMDIKIE
GITREIMQVALNQAKGARLHILSVMEQAISGPRGDISQFAPRIHTIKISVDKIKDVIGKG
GSVIRALTEETGTTIEIEDDGTVKIAATDGEKAKFAIRRIEEITAEIEVGRIYNGKVTRI
VDFGAFVAIGGGKEGLVHISQIADKRVEKVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEA
GEQAQPEAEAAPATPEAE
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
ttgtcattagtcgcgaggatgcaaaatgaagatttgaaacccacggccggtaaaaatacc
cgcccggatgttaaggaactaactttgctgaacccgatcgtaaaaaaattccagtatggc
cagcacaccgtcactcttgaaaccggaatgatggctcgccaggcaacggcagccgttatg
gtgagcatggatgacactgctgttttcgtcaccgtggttggtcagaaaaaatcaaaacct
ggtcaggatttcttccctttgaccgtaaactaccaggagcgtacctacgctgctggccgt
attccaggcagctttttccgtcgtgaaggccgcccaagcgaaggcgaaacgctcacctcg
cgcctgattgaccgtccaatccgtccgctgtttccggaagggtttgtcaatgaagtgcag
gtgattgccaccgtggtctccgttaaccctcaggttaacccggatatcgtcgccatgatc
ggtgcttctgctgcgctggcgctgtctggcctgccgtttaacggacctatcggtgcggca
cgcgtcggttacctgaacgatcagtacgtgcttaacccaaccagcgatgagctgaaagag
agcaagctggatctggttgttgccggtactaaaggtgcggtgctgatggttgagtctgaa
gccgagctgctgagcgaagagcagatgctgggggcggtggtatttggccacgaccagcag
cagatcgtcatcgataacatcaatgcgctggttgctgaagcgggcaaaccacgttgggac
tggcagccagaagcggttaacgaggcgttgcgttcacgcattgctgcactggccgagtct
cgcctgagcgatgcttatcgcattactgaaaagcaggagcgctacgctcaggttgatgtc
atcaaatctgaaaccacggctgcgctgctggcggaagacgaagcgctggacgctggtgaa
atcagcgatctgctgcacgcgctggaaaaagacgtggtacgcagccgcattctgcgtggc
gaaccgcgtatcgacggccgtgaaaaagacatgatccgtggtctggacgtgcgcaccggc
gtgctgccgcgtactcatggctccgcactgttcacccgtggtgaaactcaggcgctggtc
accgccacgctgggtactgcccgtgatgcgcagaacctcgacgagctgatgggcgagcgt
actgacaacttcctgttccactacaacttccctccgtactctgtcggcgaaactggcatg
gtgggttcgcctaagcgtcgtgaaattggtcacggtcgtctggcgaagcgtggcgtgctg
gccgtgatgccaaaaggcgatgctttcccgtataccgtgcgtgtggtgtctgaaatcact
gaatcaaacggctcgtcttcgatggcgtccgtttgtggtgcgtctctggcgctgatggat
gcaggcgtgccaatcaaggccgctgtagccggcatcgcgatgggtctggttaaagacgac
aacaactttgttgtgctgtccgatattctgggcgacgaagatcacctgggcgacatggac
ttcaaagtagccggtagccgtgaaggcatcaccgcgctgcagatggacatcaaaattgaa
ggtatcacccgcgaaatcatgcaggtggctctgaaccaagctaagggtgcgcgtttgcac
attctgagcgtcatggagcaggctatcagcggtccgcgtggcgatatttctcagtttgca
ccgcgtatccacaccatcaagatcagcgttgataaaatcaaagacgtgatcggtaaaggt
ggctcggtcattcgtgcgctgacggaagaaaccggcaccactatcgaaatcgaagatgat
ggcacggtgaaaatcgcggctaccgacggtgaaaaagctaaatttgctatccgtcgtatc
gaagagatcaccgcagagatcgaagtgggtcgtatctacaacggtaaagtgacgcgcatc
gttgattttggtgcctttgtggctatcggtggtggtaaagaaggtctggtacatatttct
cagatcgccgacaagcgtgtagaaaaagtgacagactatctgcaaatgggccaggaagtt
ccggtgaaagtactggaagttgaccgccagggtcgcgtacgcctgagcatcaaagaagct
ggcgaacaggctcagcctgaagcagaagccgctcctgccacaccagaagccgaataa
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