Erwinia pyrifoliae DSM 12163: EPYR_00435
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Entry
EPYR_00435 CDS
T02121
Symbol
ygjF
Name
(GenBank) G/U mismatch-specific DNA glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
epr
Erwinia pyrifoliae DSM 12163
Pathway
epr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
epr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EPYR_00435 (ygjF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
epr03400
]
EPYR_00435 (ygjF)
Enzymes [BR:
epr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
EPYR_00435 (ygjF)
DNA repair and recombination proteins [BR:
epr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EPYR_00435 (ygjF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
CAY72754
LinkDB
All DBs
Position
498113..498619
Genome browser
AA seq
168 aa
AA seq
DB search
MEAQGITDIIQPGLRVLFCGINPGKSSAHTGFHFAHPGNRFWKTIFQAGFTRTQLKPEQE
QQLLATGCGITMLVERPTVLASELASSELRSGGKALVDKIERFQPAALAVLGKQAYQQAF
RRSQVAWGRQPLAVGATEIWVLPNPSGLNRASQQEMTEAYAQLHLALA
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atggaagcacagggtattaccgatatcattcagcccggtctgcgggtgctgttctgcggt
atcaatcccggcaagtcctctgcccataccggctttcattttgcccaccccggtaaccgc
ttctggaaaaccattttccaggcggggttcacccgaacccagctcaagcctgaacaggaa
cagcagctattggcaaccggttgtggcatcaccatgctggtcgagcggccaacggtgctg
gccagtgagctggccagcagcgaactacgcagcggtggaaaggcgctggtggataagatt
gaacgttttcagcctgctgcgctggcggtgctgggtaagcaggcttatcagcaggcgttt
cgccgtagtcaggtggcgtggggcaggcagcctctggccgtgggcgcgacggaaatctgg
gtactgcccaaccccagtggactgaaccgcgcttcccagcaggaaatgacggaggcctat
gcacagctgcatctggcgctcgcttag
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