Erwinia pyrifoliae DSM 12163: EPYR_01823
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Entry
EPYR_01823 CDS
T02121
Symbol
pgpB
Name
(GenBank) phosphatidylglycerophosphatase B
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
epr
Erwinia pyrifoliae DSM 12163
Brite
KEGG Orthology (KO) [BR:
epr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
epr03016
]
EPYR_01823 (pgpB)
Enzymes [BR:
epr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
EPYR_01823 (pgpB)
Transfer RNA biogenesis [BR:
epr03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
EPYR_01823 (pgpB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
PilZ
ODP
Motif
Other DBs
NCBI-ProteinID:
CAY74203
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All DBs
Position
complement(1921971..1923914)
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AA seq
647 aa
AA seq
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MFQDNPLLAQLKEKLHSQTPRVEGVVKGTEKGFGFLEVDAQKSYFIPPPFMKKVMHGDRV
SAVIQSEKDREVADPETLIEPFLTRFVGRVQKKDDRLSIIPDHPLLKDAIQCRPERNVKH
DFQTGDWAVAEMRRHPLKGDRTFYAELTEFITTADDHLAPWWVTLSRHNLEREAPDVATP
QEMLDEQLEREDLTALPFVTIDSASTEDMDDALYVEDVGNGVLKLIVAIADPTAYVPVNS
KLDAVAAERAFTNYLPGFNIPMLPRQLSDDICSLRPHERRPVLACRVTLAADGSPADDVQ
FFAAWIESHAKLAYDPVSDWLETEEAGAWQPENEAIANQIRLLNRLCLARSEWRQAHALV
FKDRPDFRFHLGEKGEVLDIIAEHRRIANRIVEESMILANICAANVLRDKLGFGIYNVHH
GFDEVNAGQAAAVLANHGVTADPLAIATLDGFRNLRRELDALPTQFLDSRIRRFQSFAEV
STTPGPHFGLGLEAYATWTSPIRKYGDMINHRLLKAIIKGEESTRPADELTLKMAERRRQ
NRMAERDVGDWLYSRFLQKAVGSEQRFSAEVIDVSRGGMRVRLQENGAVAFIPAPFLHAV
RDELVCSNENGSVQIKGEVVYRVTDLIEVTIAEVRMETRSIVARPVA
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaggataacccgctgctcgcgcagcttaaagagaagctccactcccagacgccg
cgcgttgaaggtgtggtaaaaggcactgaaaaaggtttcggcttcctggaagtcgatgca
caaaaaagttactttatccccccgccgtttatgaaaaaagtcatgcacggtgaccgcgtc
agtgcggttattcaaagcgagaaggatcgcgaagttgccgatccggaaacgctgattgaa
cctttcctgacgcgctttgtcggccgtgtccagaagaaagacgaccggctgtcgattatt
cccgaccatcccctgctgaaagatgctattcaatgccgccctgagcgtaatgtgaagcat
gacttccagaccggcgactgggccgtggctgaaatgcgccgtcacccgctgaagggcgat
cgcaccttctatgccgaactgaccgaatttatcaccacggcggatgatcatctggctcca
tggtgggtcactctttcgcggcataatctggagcgtgaagcgccggatgtcgctacgccg
caagagatgctggatgaacagctggaacgcgaagatcttacggctctgccatttgtcact
atcgacagtgccagcaccgaagatatggacgatgcgctgtatgtggaagacgtcggtaac
ggtgtgcttaagctgatcgttgctatcgctgacccaacagcctatgttccggtgaacagc
aagctggatgcggtcgcggctgaacgcgcgttcaccaactacctgcccggtttcaacatc
ccaatgctgccacgccagctgtcagatgatatctgttcgctacgcccgcatgagcgccgc
ccggtgctggcgtgccgcgttactctcgccgcagatggttcacccgcagacgacgttcag
ttcttcgccgcctggattgaatctcacgctaagctggcgtatgaccctgtttctgactgg
ttagaaaccgaggaagcaggcgcatggcagcctgaaaacgaggcaatcgccaaccagatc
cgcctgctaaaccgcctctgtctggcgcgcagcgagtggcgccaggcgcatgctctggta
ttcaaagaccgcccagacttccgcttccatctgggtgagaaaggtgaagtactggatatt
attgccgaacaccgccgcattgctaatcgtatcgttgaagaatcgatgatccttgctaat
atctgcgctgccaatgtgctgcgtgacaaactgggctttggtatctataacgtccaccac
ggtttcgacgaagtcaatgccgggcaggccgcagcggtactggctaatcatggcgtaacc
gctgacccgctggcgattgccacgctggatggcttccgcaatttgcgccgcgaactggat
gccctgccgactcagttcctcgacagccgtattcgccgcttccagtcatttgccgaagtc
agcaccacgccaggtccgcactttggtctcggcctggaggcatatgccacctggacctcc
ccgatccgtaagtatggcgatatgattaaccaccgcctgctgaaagctatcattaaaggg
gaagaaagcactcgtcctgccgacgaactgacgttgaagatggcggaacgccgccgtcag
aaccgtatggccgagcgcgatgtgggtgactggctgtactcgcgtttcctgcaaaaagcg
gttggtagcgagcagcgtttcagtgcggaagtgattgatgtctcccgtggcggcatgcgt
gtacgcctgcaggaaaacggtgccgttgcttttatccctgccccatttcttcatgccgtg
cgtgatgagctggtatgcagtaacgagaatggcagcgttcaaatcaaaggcgaagtggtt
taccgcgtcaccgacctgattgaagtgacgattgctgaagtacgtatggaaacccgcagt
atcgtcgcccgcccggtagcctga
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