Erwinia pyrifoliae DSM 12163: EPYR_02246
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Entry
EPYR_02246 CDS
T02121
Symbol
ymfC
Name
(GenBank) ribosomal large subunit pseudouridine synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
epr
Erwinia pyrifoliae DSM 12163
Brite
KEGG Orthology (KO) [BR:
epr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
epr03009
]
EPYR_02246 (ymfC)
Enzymes [BR:
epr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
EPYR_02246 (ymfC)
Ribosome biogenesis [BR:
epr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
EPYR_02246 (ymfC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Cyc-maltodext_C
Motif
Other DBs
NCBI-ProteinID:
CAY74626
LinkDB
All DBs
Position
2327898..2328554
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AA seq
218 aa
AA seq
DB search
MRLLFLSAKTMRKTSFTHHHTKRNRPRSAAKPAGKSPRCVVLFNKPFDVLPQFSDGSGRR
TLKDYVPQLGIYAAGRLDRDSEGLMVLTNDGELQAQLTQPGKRTGKVYYVQVEGCPQEGD
LQPLRDGVNLKDGPTLPAVVEKVAAPDWLWDRQPPIRERKAIPTCWLKITLYEGRNRQVR
RMTAHIGFPTLRLIRFSMGSLGLRALAPGEWRDISDEI
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttattgttcctgagtgcaaagactatgcgaaaaacttcctttactcatcatcac
actaagcgcaaccgtccccgctctgccgcaaagccagcaggcaaaagcccccgctgcgtg
gtgctgtttaacaaaccgttcgatgtgttaccacaatttagcgatggatccggtcgtcgc
accctaaaagattacgttccgcagttgggtatttacgccgcaggcaggcttgaccgcgat
agtgaagggctgatggtgttaaccaatgacggcgagctacaagcgcagcttacccagccg
ggtaagcgtaccgggaaagtctattatgtgcaggttgaaggctgcccgcaggaaggcgat
ctgcagccgctgcgcgatggggtaaatctgaaagatggccctaccctgccagcagtggta
gaaaaggtggctgcccccgactggttgtgggatcgtcagccacccatccgcgaacgcaaa
gccattccaacctgctggctgaaaataaccctttatgaaggacgtaaccgccaggtcagg
cgtatgaccgctcatatcggttttccaactttgcgcctgatccgtttttctatgggtagt
ttagggctacgggcgctggcacctggagagtggcgtgatatcagtgatgaaatctga
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