Erwinia pyrifoliae DSM 12163: EPYR_02828
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Entry
EPYR_02828 CDS
T02121
Symbol
smdA
Name
(GenBank) heterodimeric multidrug efflux pump
KO
K18889
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
epr
Erwinia pyrifoliae DSM 12163
Pathway
epr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
epr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
EPYR_02828 (smdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
epr02000
]
EPYR_02828 (smdA)
Transporters [BR:
epr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
EPYR_02828 (smdA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
AAA_18
AAA_29
AAA_22
ABC_ATPase
NB-ARC
Zeta_toxin
DUF87
KAP_NTPase
AAA_23
Motif
Other DBs
NCBI-ProteinID:
CAY75208
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Position
complement(2880095..2881864)
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AA seq
589 aa
AA seq
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MRLFSQLSWFFLREWRRYLGAVLLLIVIAVLQLLPPYVVGKIVDGVSHGVMSTGQLIMWI
GAMIITAIIVYLLRYVWRILLFGASYHLAVELREDFYRQLSRQHPEFYLRHRTGDLIARA
TNDVDRVVFAAGEGVLTLVDSLVMGMVVLVVMSSQISWQLSLLALLPMPIMAMVIKHYGD
QLHHRFKSAQAAFSSLNDQTQESLSSIRMIKAFGLENHQSGQFAAIAQDTGEKNLRVARI
DARFDPTIYIAIALSNLLAVGGGSWMVWHGSMTLGQLTSFVMYLGLMIWPMLALAWMLNI
VERGSAAWSRIRSLLSEAPVVADGNKSLPEGRGMLQIAIREFCYPGVQQPVLRNLNVNIK
PGQMLGLCGSTGSGKSTLLSLIQRHFDIEQGGIRFHAIPLPQLRLDAWRSRLAVVSQTPF
LFSDSVAKNIALGRPAATQSEIEHAAQLANVHEDILRLPQGYETEVGERGVMLSGGQKQR
ISIARALLLNTEILLLDDALSAVDARTEHQILQNLRRWGEGRTVIISAHRLSALAEASEI
LVLQYGAVAQRGDHEQLLAMEGWYREMYRYQQLEAALDEDDIVQGVTHG
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
ttgcgactttttagccaactgagctggtttttcttgcgagaatggcgccgatatctcggt
gcggtgctgctgctgattgtcattgctgtacttcagctattgccaccttatgttgtaggc
aaaatcgttgacggcgtcagccatggggtcatgagcaccgggcagctgataatgtggatt
ggcgcaatgataatcaccgcgataatcgtctatttactgcgctatgtctggcgcatactg
ctatttggtgcctcttaccatttggcggttgaactgcgtgaagatttttaccgccagcta
agccgtcagcaccctgaattttatttgcggcaccgcactggcgatctgattgccagagcc
accaatgacgttgaccgggtcgtctttgcagccggagaaggcgtcctgacgctggtggac
tcactggtaatgggcatggtggtgctggtggtgatgagcagccaaattagctggcagctc
tccctgctggccctgctgccgatgccgatcatggcgatggtgatcaaacattacggcgac
cagctacatcatcgttttaaaagcgcacaggccgccttctcctcattaaacgatcaaacc
caggaaagtctgagcagtatccgcatgatcaaggcatttggtttagagaaccatcagtcg
ggccagttcgcagccattgctcaggataccggggaaaaaaacctgcgtgtggcgcgcatt
gatgcacgtttcgatcccaccatctacatcgccatcgctctgtcaaacctgttggctgtc
ggtggggggagttggatggtctggcatggttcgatgacgcttgggcagctaaccagtttt
gttatgtatctcggtttgatgatctggccaatgctggcgctggcgtggatgctgaatatt
gttgaacgcggtagcgccgcctggagccgtatccgctcgctgctgtccgaagcgccggtg
gtcgccgatggtaataagtcgctgccggaagggcgtgggatgctgcaaattgctatccgg
gagttttgttatcctggcgtgcagcagcctgtgctacgtaacctcaatgtgaatatcaaa
cccgggcaaatgctggggctgtgtggctccaccggctcgggcaaaagtacgctactcagc
ctgatccagcgccattttgatattgaacaggggggcattcgttttcatgcaatcccactg
ccacagttgcgtcttgacgcctggcgcagcaggttggcggtagtcagccaaaccccgttc
ctgttctctgacagcgtggcaaaaaatattgccttaggtcgtcctgctgccacgcagagc
gagattgagcatgcggcgcaactggccaacgtgcacgaggatatactgcgcttgccgcaa
gggtacgagacggaggtaggcgaacgcggggtgatgctttccggcgggcaaaaacagcgt
atttccatcgcgcgtgcgctgctgctgaatactgaaattctgctgctggatgatgccctg
tctgcggtggacgctcgtactgaacaccaaattctgcaaaatttgcggcgctggggagaa
gggcgcacggtgatcatcagcgcacatcgtctatctgcattggccgaggccagtgaaatt
ctggtattgcagtatggtgccgttgcccagcgtggtgatcatgaacagctgctcgccatg
gaaggctggtatcgtgaaatgtatcgctatcagcagctggaagcggcgttagatgaagat
gacatcgtacagggagtgacacatggctaa
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