Erwinia pyrifoliae DSM 12163: EPYR_02889
Help
Entry
EPYR_02889 CDS
T02121
Symbol
sbcD
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
epr
Erwinia pyrifoliae DSM 12163
Brite
KEGG Orthology (KO) [BR:
epr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
epr03400
]
EPYR_02889 (sbcD)
DNA repair and recombination proteins [BR:
epr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EPYR_02889 (sbcD)
Archaeal homologous recombinant proteins
EPYR_02889 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
UBM
Motif
Other DBs
NCBI-ProteinID:
CAY75269
LinkDB
All DBs
Position
2940506..2941918
Genome browser
AA seq
470 aa
AA seq
DB search
MRFTIIAPAAVTGCHGIGDISMRQFYDTFMKKAPAKREMKRIKYPYGFMFIIIASRFCLR
GITMRIIHTADWHLGQFFYTKSRAAEHQAFLDWLLEQAETQQADAIIVAGDIFDNGSPPS
YARQLYNRFVVKLQTTGCQLVVLGGNHDSVAMLNESRELLACLNTRVIAAVDEDIRQQVL
VLNRRDGQPGALLCAIPFLRPRDILRSQSGQSGREKQQSLLEAISDHYQRCWQEALAQRD
ALGLPLPIIATGHLTTMGVTKSDAVRDIYIGTLDAFPADGFPPADYIALGHIHRAQRIAD
SDHIRYSGSPIPLSFDELGKAKSVMRVDFHAGKLAGVTELPIPLFQPMQMIKGSLEQIER
QLAQLKPDARGKTIWLDIEIVTDAYLSEPQRRIEELTAALPVEVVLLRRSREQREQVIAR
QQNETLSELSVEEVFARRLASAPNQPERPERISALFAQTLEAVRHEEQPL
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgcgctttaccattattgctcctgctgcggtgaccggttgtcacgggataggcgacatc
agtatgcgtcagttttatgacacttttatgaaaaaagcacctgcaaaaagggagatgaaa
cgaattaaatatccgtacggctttatgtttataatcatcgcttcgcgtttctgcctccgg
gggatcaccatgcgcatcattcatactgccgactggcatctcggccagtttttctacacc
aaaagccgggcggccgagcaccaggcttttcttgactggctgctggaacaggcggaaacg
cagcaggccgatgcgattatcgtcgccggtgatatcttcgataacggctccccgccgagt
tacgcacgccagctctacaaccgctttgtggtaaagctgcaaacaaccggctgtcagctg
gtggtgctgggcggcaatcacgattcggtcgccatgctcaatgaatcgcgtgagctgctg
gcctgcctgaatacccgggtgatcgccgccgtcgatgaggatatccgtcagcaggtgctg
gtgctgaaccgccgcgacgggcagccgggcgctctgctgtgcgccattccgttcttacgc
ccgcgcgatatcctgcgcagccagagcgggcagtcggggcgcgaaaaacagcaaagcctg
ctggaagccatcagcgatcactatcagcgctgctggcaggaagcgctggcgcagcgtgat
gcgctgggtttgccgctaccgattatcgccaccggtcatctgaccaccatgggcgtcacc
aaaagcgatgcggtgcgcgatatctatatcggcacgctggacgctttcccggccgacggc
tttcccccggcggattacatcgccctcggccatattcaccgcgcccagcgcattgccgac
agcgaccatattcgctacagcggctcgccgatcccgctcagttttgacgagctgggcaag
gccaaaagcgtgatgcgggttgatttccatgccggcaagctcgccggggtgaccgagctg
ccaatcccgctgtttcagccgatgcagatgatcaaaggctccctggagcagatagaacgg
cagctggcgcagctaaaaccggatgcacggggcaaaaccatctggctggatattgaaatc
gtcaccgacgcttacctcagcgaaccacagcgccgcattgaggaactgaccgccgcgctg
ccggttgaggtggtgctgctgcgccgcagccgcgaacagcgggaacaggtgatagcgcgc
cagcagaatgaaacgctgagtgaactgagcgttgaggaggtgtttgcgcggcggctggca
tcggcaccaaatcagcccgagcgcccggaacgcatcagtgcgctgtttgcccagacgctg
gaagcggtgcgccatgaggagcagccattatga
DBGET
integrated database retrieval system
