Erwinia pyrifoliae DSM 12163: EPYR_03081
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Entry
EPYR_03081 CDS
T02121
Symbol
yqcB
Name
(GenBank) tRNA pseudouridine synthase C
KO
K06175
tRNA pseudouridine65 synthase [EC:
5.4.99.26
]
Organism
epr
Erwinia pyrifoliae DSM 12163
Brite
KEGG Orthology (KO) [BR:
epr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
epr03016
]
EPYR_03081 (yqcB)
Enzymes [BR:
epr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.26 tRNA pseudouridine65 synthase
EPYR_03081 (yqcB)
Transfer RNA biogenesis [BR:
epr03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
EPYR_03081 (yqcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
CAY75461
LinkDB
All DBs
Position
complement(3129256..3130053)
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AA seq
265 aa
AA seq
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MLEIIYQDRWLVAVNKPSGMLVHRSWLDRHETVFAMQTVRDQIGQHVFTVHRLDRPTSGV
LLMALSSEVARLLSQQFEQHQLQKTYHAVVRGWLEGADTLDYPLTEEQDKIADKFSQPEK
APQPAVTHWRGVATAELPVPVGRYQTSRYSLVEMLPESGRKHQLRRHMTHLRHPIIGDSA
HGDLKQNRSAAANFGMNRLMLHASELNLTHPVTAEPLMLRAGLDAVWQKVINQLGWQANL
PDVMRAGLAQQTAQNEVSVDGENNG
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaaatcatttatcaggatcgctggctggtggcggtcaataagccgtccggtatg
ctggtgcaccgcagctggctcgatcggcatgaaaccgtgtttgccatgcagacggtacgc
gaccagattggccagcatgtgtttaccgtacatcgcttggatcgtccgacttccggcgta
ctgctaatggccctgtcgagcgaggttgctcgtcttctgtcgcagcagtttgaacagcac
cagctgcaaaaaacctatcatgcggtggtgcgtggctggctggaaggggccgatacgctc
gactacccactgaccgaagagcaggataaaattgccgataaattcagtcagccggagaaa
gcaccacagccagcggtgacgcactggcgtggcgtggccaccgccgaactgccggtgccg
gtcgggcgctatcagacttcacgctattcactggtggaaatgttgcctgagtccgggcgt
aaacatcagttgcgccgtcatatgacccatctgcgccacccgattattggcgacagcgcc
cacggtgatttgaagcagaaccgttctgcggcggcaaactttggcatgaatcgtctgatg
ctgcacgccagcgaactcaatctgacgcatccggtcactgccgagccgttaatgttgcgc
gccgggttggatgcggtctggcagaaggtcatcaatcagcttggctggcaggcgaatctg
cctgacgtgatgcgggcagggctggcgcagcagaccgcacaaaatgaagtatcagttgat
ggagagaataatggctga
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