Erwinia pyrifoliae DSM 12163: EPYR_03100
Help
Entry
EPYR_03100 CDS
T02121
Symbol
recB
Name
(GenBank) DNA helicase, ATP-dependent dsDNA/ssDNA exonuclease V subunit, ssDNA endonuclease
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
epr
Erwinia pyrifoliae DSM 12163
Pathway
epr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
epr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EPYR_03100 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
epr03400
]
EPYR_03100 (recB)
Enzymes [BR:
epr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
EPYR_03100 (recB)
DNA repair and recombination proteins [BR:
epr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EPYR_03100 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
CAY75480
LinkDB
All DBs
Position
complement(3148041..3151577)
Genome browser
AA seq
1178 aa
AA seq
DB search
MSQRAAETLEPLSLPLHGERLIEASAGTGKTFTIGLLYLRLLLGLGGAAAFSRPLSVEEI
LVVTFTEAATAELRGRIRANIHELRIACIRGKSPNLMLAALIAEIADLPQAASVLLAAEH
QMDEAGIFTIHGFCQRMLNLNAFESGMLFDQQLLEDETPLRRRAAADFWRRYCYPLPLPV
ARVVRQLWAGPEQLLKTLSPWLGGEAPVLKSAPESDETLEQRHEKIIARISMLKQAWLAA
GNLQQVIDASGVDRRSYNSKHLPNWLEKISLWAQAETQDYQLPKDLERFGQRILLEKTKK
GEPPRHPLFDQIDAFLAEPLSLRDLVIARALQQVRFVTQQEKRLHGQLGFDDLLGRFDFA
LQQPGGEALASAIRQRYPVALIDEFQDTDPQQYRIFRTLYRRQADSALLLIGDPKQAIYA
FRGADIFTYMKARSEVSAHYTLETNWRSSPAMVNAVNQLFLRQKNPFLFNEIPFINVNPA
APNHGLNFSVQGKVQPALQFWLQPGNGVGVSDYQQFMARQCAAEICRWLTAGQQGEALIG
NTGKQSPVQASDITVLVRSRSEAAVVREALYALAIPSVYLSNRDSVFTTPEAREMLWLLQ
AVLAPEQERVLRSALATSLFGTDALALDALSQDERAWDALVDEFVDYRQRWLQRGVLPML
RELMMKRQIAENLLASDNGERRLTDLLHVGELLQEASATLDSEHALVRWLAQQVEQPDGQ
SSVQQLRLESDRHLVQIVTIHKSKGLQYPLVWLPFVANFREADNGVYHDRQTFTALLDLQ
QSEESIELAEQERLAEDLRLLYVALTRSVFHCSVGIAPLIKGARKKEGNSDLHCSALGYL
VQQGEPADASGLLAALQALNGDAIALMRPAEADATPWQAQQTEPQILSSRTLPRSLRDNW
RVTSYSGLQQHGHSIALELLPRLDVDAAGEASNEPVPQLTPHTFPRGAGPGTFLHGLFET
LEFTTPLDEEWLAQQLSSQGLGDEWQPVMRDWVERILHTPLNETGVSLYQLPAQARKAEL
QFYLPISRLLTAEALDRVVRQDPLSQPCPPLDFHQVQGMLKGFIDLVFCWQGKYYLLDYK
SNWLGEDSSAYTREAMAQAMQAHRYDLQYQLYTLALHRYLRHRLVVYDYQQHFGGVIYLF
LRGLDGAAGSNGIYFTRPQPEFVTALDQLFASPPESNL
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgagccaacgagccgctgaaacgctggagccgctgagccttcccctgcacggcgagcgg
ctgattgaagcttcggccgggacgggaaaaaccttcaccatcgggctgctctatctgcgg
ctgctgctcggcctgggaggggcggcggccttcagccgcccgctgtcggtagaagaaatt
ctggtcgttaccttcaccgaggctgccaccgccgagctgcgcgggcgtattcgtgccaat
atccacgagctgcgcatcgcctgcattcgtggtaaaagcccgaatctgatgctggcggca
ttaatagcggagatcgccgatctgccccaggcggcatcggtgctgctggcggccgagcat
caaatggacgaagccggcatttttaccattcacggcttttgccagcgcatgctgaatctc
aatgcctttgagtccggtatgctgtttgatcagcagctgctggaagatgaaacgccgctg
cgccgccgggcggcggccgatttctggcgtcgctactgttatccgctgccgctgccggta
gcacgcgtggtgcgccaactgtgggcggggccggagcagttactgaaaaccctgtcgccg
tggcttggcggcgaagcgccagtgctgaaatcggcgccggagagcgatgagacccttgag
cagcgccatgagaaaatcattgcgcgcatcagcatgttgaaacaggcgtggctggcggcg
ggtaatttacagcaggtgattgacgcttccggcgttgatcgccgcagctacaatagtaag
cacttaccaaactggctggagaaaatctccctgtgggcgcaggcagagacgcaagactac
cagctgccaaaagaccttgagcgcttcggccagcgcatcctgctggagaaaacgaaaaaa
ggtgagccgccacgtcaccccctgttcgatcaaattgacgcctttctcgccgagccgctg
tcgctccgtgacctggtgattgcccgcgcgctgcagcaggttcgctttgtcacccagcag
gagaaacgactgcatggccaactgggatttgacgatttgttgggacgcttcgattttgcc
ctccagcagccgggtggtgaggcgctggcttcagctatccgccaacgttatccggtggcg
ctgatcgatgaattccaggacaccgacccgcagcagtatcgtattttccgcacgctgtat
cgtcggcaggctgacagtgcactgctactgatcggcgacccgaaacaggcgatctacgcg
tttcgcggcgcggatatctttacctatatgaaagcgcgctctgaagttagcgcccactat
acgctggagactaactggcggtcgtctccggcaatggttaatgcggtcaatcagctgttt
ttacgccagaaaaacccgttcctcttcaacgaaataccctttattaacgtcaatccggct
gcgcctaatcacggcctgaactttagcgtgcagggtaaagtgcagcctgctctgcagttc
tggctacagcccggtaatggagtgggggttagtgattaccaacagtttatggcgcgtcag
tgcgcggcggaaatctgccgctggctcactgcgggtcagcagggcgaggcgttaatagga
aataccgggaaacagagtccggtacaggcctcggacattaccgtgctggtgcgcagccgc
agtgaagccgcagtggtgcgcgaagcgttatatgctctggccattccgtcagtttacctc
tccaaccgtgacagcgtatttaccacgccggaagcgcgcgaaatgctgtggctgttacag
gcggtgctggctccggagcaggagcgcgttctgcgcagcgcgctggccaccagcctgttt
ggcaccgatgcgctggcgcttgatgcgctcagccaggacgaacgcgcatgggatgcgctg
gtggatgagttcgttgattatcgccagcgctggctgcaacgcggcgtgctgccgatgctg
cgtgagctgatgatgaaacgccagatagccgaaaacctgctggcctccgataacggtgaa
cgccggctgaccgatctgctgcatgtgggcgaactgttgcaggaagcctctgccaccctc
gacagcgaacatgcgctggtgcgctggctggcgcagcaggtggagcagccggatggccag
tcatccgttcagcagctgcgtctggagagcgatcgccatttggtacagattgtcactatc
cacaaatccaaaggtttgcagtatccgctggtgtggctgccgtttgtcgccaactttcgc
gaggcggataacggcgtttaccatgaccggcagacgtttaccgcgttgcttgatttacag
cagagcgaggaaagtatcgaactggcggagcaggagcggctggcggaagatctgcgattg
ctctacgtcgcactgactcgttcggtatttcactgtagcgttggcatcgcgccgctgatt
aagggcgcacgtaagaaagagggcaacagcgacctgcattgcagcgcgctgggctatctg
gtgcagcagggtgaaccggccgatgcctccggcctgctggcggcattacaggcgttgaac
ggtgatgccatagcgttaatgaggccagcagaggcagatgccaccccgtggcaggcgcag
caaacggagccgcaaatcctcagcagccggacgctgccacgctcgctgcgtgataactgg
cgcgtgaccagttattccggtctgcaacagcacggccattcaattgcgctggaattgctg
ccgcgcctcgacgttgatgcggccggggaagccagcaatgaacccgttccgcagctgacg
ccgcataccttcccgcgcggtgccgggccgggaacatttcttcacgggctgtttgaaacg
ctggaattcaccactccgctggatgaagagtggctggcgcagcaactcagcagccagggg
ctgggggatgagtggcagccggtgatgcgcgactgggttgagcgcatcctgcataccccg
cttaatgagacgggcgtcagcctttaccagctgccagcacaagcaaggaaggcggagctg
cagttttatttgccgatctcccgtctgctgacggcagaggcgctggacagggtggtacgt
caggacccgctgtcgcagccctgcccaccgctcgactttcaccaggttcagggcatgttg
aaaggttttatcgatctggtgttctgctggcagggtaaatattacctgctggactataaa
tctaactggctgggcgaagacagcagcgcctatacgcgggaggcgatggcgcaggcgatg
caggcgcatcgttatgatttgcagtaccagctttacacgttggcgctgcaccgctatctg
cgtcaccgtctggttgtttacgactaccagcagcactttggtggcgttatctatctgttt
ctgcgtggtctggacggtgcggctggcagtaacgggatttactttacccgaccgcagccg
gagtttgtcaccgctcttgaccaactgtttgccagccccccggagagtaacctatga
DBGET
integrated database retrieval system
