Erwinia pyrifoliae DSM 12163: EPYR_03959
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Entry
EPYR_03959 CDS
T02121
Symbol
thdF
Name
(GenBank) tRNA modification GTPase trmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
epr
Erwinia pyrifoliae DSM 12163
Brite
KEGG Orthology (KO) [BR:
epr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
epr03016
]
EPYR_03959 (thdF)
Transfer RNA biogenesis [BR:
epr03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
EPYR_03959 (thdF)
Prokaryotic type
Methyltransferases
EPYR_03959 (thdF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
AIG1
Dynamin_N
RsgA_GTPase
Ras
Roc
ABC_tran
Arf
AAA_28
SRPRB
Gtr1_RagA
Rogdi_lz
AAA_18
AAA_29
Motif
Other DBs
NCBI-ProteinID:
CAY76339
LinkDB
All DBs
Position
4000047..4001450
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AA seq
467 aa
AA seq
DB search
MTALFFCIKREFNMNHSDTIVAQATPPGRGGVGILRVSGHKAAGVAQLLLGKLPKPRYAD
YLPFRDADGSTLDQGIALWFPGPNSFTGEDVLELQGHGGPVILDLLLKRILSLPGLRIAN
PGEFSERAFLNDKLDLAQAEAIADLIDASSEQAARSAVNSLQGVFSTRVNRLVEALTHLR
IYVEAAIDFPDEEIDFLSDGKIEAQLHQVIDSLDAVRSEARQGSLLREGMKVVIAGRPNA
GKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLREASDEVERIGIE
RAWHEIEQADHVLFMVDGTTTDATDPAEIWPDFIARLPETLPVTVVRNKADITGEIKGVE
KVSAHSLIRLSARTGEGIENLRDHLKLSMGFSGNMEGGFLARRRHLQALELAATYLQQGK
HQLLAARAGELLAEELRMAQQALSEITGEFSSDDLLGRIFSSFCIGK
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgccttatttttttgcataaaaagagaattcaacatgaaccatagcgataccatc
gtcgctcaggcgacgccgccggggcgtggcggcgtcggcatcctgcgtgtttccggccac
aaagccgccggggtggcgcagctactgctgggtaaactgccaaaaccgcgctacgccgac
tatctgccatttcgcgatgcggacggtagcaccctcgatcaggggattgcgctgtggttt
cccggcccgaactcctttaccggtgaagacgtactggaactgcagggccacggtggcccg
gtgatcctcgacctgctgctgaagcgcatcctgtcattgcccggactgcgcatcgctaat
cctggcgagttctcggagcgcgctttcctgaatgacaagctggatctggcccaggcagag
gcgattgccgacctgattgatgccagctcagagcaggcggcgcgttctgcggtcaactca
ttgcagggggtcttttctacccgcgttaaccgtcttgtggaagcacttactcacctgcgg
atatacgtggaagcggccatcgacttcccggatgaagaaatcgacttcctgtcggatggc
aaaatagaggcccagctgcatcaggtcattgactccctcgacgcggtgcgtagcgaagca
cgccaggggagcctgctgcgtgaagggatgaaagtggtgattgccgggcgacccaatgcg
gggaaatccagcctgctgaacgcgctcgccggacgcgaagccgctattgtcaccgatatt
gcaggcacaacgcgtgacgtgctgcgtgaacatatccatatcgatggtatgccgctgcat
attattgataccgccgggctgcgcgaagccagtgatgaagtcgaacgtattggtatcgag
cgtgcctggcatgaaattgaacaggcggatcatgtgctgtttatggtggatggaaccacc
accgatgccaccgatccggcagagatttggccggactttatcgcccgactaccggagacg
ttgcccgttaccgtggtacgcaataaagccgatatcactggcgaaataaagggcgttgaa
aaagtaagtgcccactcacttatccgcctttcggcacgtaccggcgaaggcattgaaaat
ctgcgcgaccatttgaagttgagcatgggcttttccggcaatatggaaggcggttttctc
gcccgccgtcgtcacctgcaggcgctggagttagcagctacttacctgcagcagggaaag
catcagctattagccgcccgggccggagaactgctggcggaagagctacgtatggcacag
caggcgctgagcgaaatcaccggcgagttcagctccgatgacctgctggggcgtattttc
tccagtttttgtattggaaaataa
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