Candidatus Endoriftia persephonae: L0Y14_00330
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Entry
L0Y14_00330 CDS
T08211
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
eps
Candidatus Endoriftia persephonae
Pathway
eps00300
Lysine biosynthesis
eps00470
D-Amino acid metabolism
eps01100
Metabolic pathways
eps01110
Biosynthesis of secondary metabolites
eps01120
Microbial metabolism in diverse environments
eps01230
Biosynthesis of amino acids
Module
eps_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
eps00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
L0Y14_00330 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
L0Y14_00330 (dapF)
Enzymes [BR:
eps01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
L0Y14_00330 (dapF)
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Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
USF87728
UniProt:
A0A9J6ZYS9
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All DBs
Position
complement(71896..72726)
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AA seq
276 aa
AA seq
DB search
MQLRFSKMQGIGNDFVVFDAINQSVELSATQYRAIADRRFGVGCDQILLVESPRLPDTDF
HYRIFNADGSEVEQCGNGARCFARFVHEKGLSSKRSIPVGTTSGRIVLNLLDDGLVQVDM
GEPILDPTAIPFQADTIATSYPLQVGGEQLMIGAVSMGNPHAVLLVDSVDSFPVERLGPL
IENHPRFPQRVNVGFMQVIDRNQIQLRVFERGSGETLACGTGACAAVVAGRLQGLLDQRV
QVNLPGGNLVVEWPGEEYPVLMSGPAVTVFEGKIEL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcaactccgattcagcaaaatgcagggcatcggcaacgactttgtggtcttcgatgcg
atcaaccaaagcgtcgaactgagtgccacgcagtaccgtgccatcgccgaccgacgcttc
ggcgtcggctgtgaccagatcctgctggtggagtcgccgcgcctgcccgataccgatttc
cactaccgcatcttcaacgccgacggctccgaggtggagcagtgcggcaacggagcgcgc
tgtttcgcccgcttcgtgcacgagaaggggctgagctcgaagcgcagcatcccggtcggc
accacctcggggcggatcgtcctcaatctgctggatgacgggctggtccaggtcgatatg
ggcgaaccgatcctcgaccctaccgccatccccttccaggccgacaccattgccaccagc
tatccgctgcaggtggggggcgagcagctgatgatcggcgctgtctcgatgggcaacccg
catgcggttctgctggtcgattcggtagatagcttcccggtggagcggctcggcccgctg
atcgaaaaccatccgcgctttccgcagcgggtcaatgtcggcttcatgcaggtgatcgat
cgcaatcaaatccagctgcgggtgttcgaacgcggttccggcgagaccctcgcctgcggt
accggtgcctgcgccgcagtggtcgccggccggctgcagggattactcgatcaacgggtc
caagtcaatctccccggagggaatcttgtggtagagtggccaggagaagaataccccgtg
ctgatgagcggaccggcagtcactgtgtttgaggggaagatagaactatga
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