Candidatus Endoriftia persephonae: L0Y14_00505
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Entry
L0Y14_00505 CDS
T08211
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
eps
Candidatus Endoriftia persephonae
Pathway
eps03030
DNA replication
eps03430
Mismatch repair
eps03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
L0Y14_00505 (holA)
03430 Mismatch repair
L0Y14_00505 (holA)
03440 Homologous recombination
L0Y14_00505 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eps03032
]
L0Y14_00505 (holA)
03400 DNA repair and recombination proteins [BR:
eps03400
]
L0Y14_00505 (holA)
Enzymes [BR:
eps01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
L0Y14_00505 (holA)
DNA replication proteins [BR:
eps03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
L0Y14_00505 (holA)
DNA repair and recombination proteins [BR:
eps03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
L0Y14_00505 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
ACAD9-ACADV_C
PEX11
Motif
Other DBs
NCBI-ProteinID:
USF87762
UniProt:
A0A9J6ZYF9
LinkDB
All DBs
Position
109620..110639
Genome browser
AA seq
339 aa
AA seq
DB search
MRLRNDQLPAQLNKSLAPVYLLSGDEPLQLGEAADQVRQTARSQGFSERELLEVGPGFDW
NQLLEAGQSLSLFGDKRLLDLRLSSSKIGTPGSKAISAYLADPPPDTLLLITAPKLDRAQ
QNSKWVKGVERLGVLVLIWPIEGQRLLPWLERRLRDVGLTPEPGVVEMLSERIEGNLLAA
KQEIEKLLLLHGPGVVDQEQLAESVADSARFDVFGLVDALLAREAGRGLRMLEHLQAEGV
VAPVVLWALAREIRALAEMAAMVEQGRSVDSVMAAQRVWEKRKPLMRKGLKRRAAVWRRL
LIDCAGIDRVIKGLEKKDAWLRLQDVALGIAGVNTSALK
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgcgcaacgatcagctgccggcccaactgaacaagtcgctggctccggtctat
ctgctgagcggtgatgagccactgcaattgggcgaggcggcggatcaggtgcgtcagacg
gctaggtctcagggcttcagtgagcgtgagttgttggaggttggcccgggtttcgactgg
aatcagctgcttgaggcggggcagagcctctctctgtttggcgataagcggctcctcgat
ctacgcctgtcgagttcaaagatcggcaccccaggctccaaagcgatcagcgcctatctg
gctgatcccccccccgacaccctgctgttgatcaccgcccccaagctcgaccgagcccag
cagaatagtaagtgggtaaaaggggtcgagcggctgggcgtgctggtgctgatctggccg
attgaagggcagcggctgctaccctggctggagcggcgcttgcgggatgtggggctgacg
ccggagcccggtgtggtggagatgctgtctgagcggattgagggcaatctgcttgccgcc
aagcaggagatcgagaagctgttgctgctgcatggtcctggggttgtggatcaggagcag
cttgccgaatcagtggccgacagtgcccgctttgatgtgtttggcttggtggatgctctg
cttgccagagaggcgggccgtggtctgcgcatgctggaacacctgcaggcagagggggtg
gtggcgccggtggtgttgtgggcgctggcgcgggagattcgggcgttggcggagatggcg
gcgatggtcgagcaggggcgttcagtcgatagtgtgatggccgcacaacgcgtatgggag
aagcgcaagccactgatgcgcaagggactgaagcgacgggcggcagtctggcgtcggctc
cttatcgattgcgctggtatcgacagggtgatcaaggggctggaaaaaaaggatgcctgg
ctgcggttgcaggatgtggcgctgggaatcgctggagtgaatacctcggcgctgaaatag
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