Candidatus Endoriftia persephonae: L0Y14_01895
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Entry
L0Y14_01895 CDS
T08211
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
eps
Candidatus Endoriftia persephonae
Pathway
eps03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
eps00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
L0Y14_01895 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eps03021
]
L0Y14_01895 (rpoA)
03400 DNA repair and recombination proteins [BR:
eps03400
]
L0Y14_01895 (rpoA)
Enzymes [BR:
eps01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
L0Y14_01895 (rpoA)
Transcription machinery [BR:
eps03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
L0Y14_01895 (rpoA)
DNA repair and recombination proteins [BR:
eps03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
L0Y14_01895 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
DUF7285
Motif
Other DBs
NCBI-ProteinID:
USF88021
UniProt:
A0A9J6ZZ28
LinkDB
All DBs
Position
392245..393243
Genome browser
AA seq
332 aa
AA seq
DB search
MVDNVMEFLKPRIVNVQALSETHAKVILEPLERGFGHTLGNALRRILLSSMPGSAITEVE
IQDVLHEYTAIEGVQEDVLEILLNLKQVALVMHSRDEAVLRLQKKGPGVVSAGDITLDHD
IEIANPDLHIATLTKSGEINMTLTVKRGRGYQPSTARQSSAGEDRPIGMLQLDASFSPVR
RVAYSIESARVEQRTNMDRLVIELQTDGTIDPEEAIRRSAGILRDQLSVFVDLEAEAAEA
TAEPEEPMIDPILLRPVDDLELTVRSANCLKAENIFLIGDLIQRTEVELLKTPNLGKKSL
TEIKDVLARRGLSLGMRLEHWPPESIDEHFAH
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggtagataacgttatggagttcctgaagccacgcatagtgaatgtgcaggcgctcagt
gaaactcacgcaaaagttatcctggaaccgcttgagcgaggctttgggcacacgctcggg
aatgccttgcgtcgtatcttgctctcctctatgccaggcagtgcgattactgaggtggag
attcaggacgtcctgcatgaatacaccgcgatagagggtgttcaggaggatgtgctggag
atcctgctcaatctgaagcaggttgcattggtgatgcactcccgggacgaagcggtcttg
cggctgcagaagaagggaccaggagttgtcagtgctggggatattacccttgatcatgac
attgagatcgcaaacccggatctgcatattgctactcttaccaagagtggcgagatcaat
atgactctcacggtcaagcgtgggcgcggttatcagccgtcgactgctcgacagagttcg
gcgggtgaagatcgaccgatcggtatgttgcagcttgacgcgtcgtttagtccagtgaga
cgtgtggcttattcgatcgaatctgcgcgtgttgagcagcgcaccaatatggatcgtctg
gttatcgaattgcagaccgatggcactattgatccggaagaagcgatccgacgctcggca
ggcattctcagagatcagctctctgtctttgttgatcttgaggcggaggcagctgaagcg
actgctgaaccggaagagccgatgatcgatccgatcttgttgcgtccggttgatgatctg
gagctgacggttcgttctgcaaactgtctgaaggccgagaacatttttcttatcggtgat
ctgattcagcgcaccgaggttgagttgctcaagaccccgaatctgggcaagaagtcactc
accgagatcaaggatgtgctggcccgcaggggcctctctcttggcatgcgcttggagcat
tggccacccgagagcattgatgagcatttcgctcactga
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