Candidatus Endoriftia persephonae: L0Y14_02170
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Entry
L0Y14_02170 CDS
T08211
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
eps
Candidatus Endoriftia persephonae
Brite
KEGG Orthology (KO) [BR:
eps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eps03021
]
L0Y14_02170 (rpoH)
Transcription machinery [BR:
eps03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
L0Y14_02170 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
HTH_10
MRP-L20
Sigma70_r3
HTH_3
KORA
HTH_25
YdaS_toxin
SpoIIID
HTH_Tnp_ISL3
IF2_N
UCR_14kD
Sigma70_r1_2
GntR
Motif
Other DBs
NCBI-ProteinID:
USF88074
UniProt:
A0A9J6ZZA9
LinkDB
All DBs
Position
complement(453111..453959)
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AA seq
282 aa
AA seq
DB search
MTKELTIPIALPTGSFDAYVGAAYQLPMLSAEEERSLALQLRDQQDLQAARMLVMSHIRF
VIRIARGYSGYGLALPDLVQEGTVGLMKAVKRFDPDVGVRLVSFAVHWIKAEIHEFILRN
WRIVKVATTKAQRKLFFNLRSSKKRLGWFSREEVEGVAEDLGVKPETVLQMEARLAARDL
AFDGPNSDDEDAPATPAGFLPDHSMEPSAQLESADSAAHLQEQLGTALESLDERSREILQ
ARWLSEKKATLHELAKRFGVSAERIRQIEKAAMKKLKGQIAA
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgactaaggaactcaccattcccatcgctctgccgaccggcagtttcgacgcctatgtc
ggcgcagcctatcagctgccgatgctgagcgcagaggaagagcgctcgctggcgctgcag
ctgcgcgaccagcaggacctgcaggctgcccgcatgctggtgatgtcccacatccgcttt
gtcatccgtatcgcccgcggctactccggctacggcctggcattgcccgatctagtacag
gagggcacggtcggtctgatgaaggcggtaaaacgcttcgacccggatgtgggcgtgcgt
ttggtctccttcgccgtgcactggatcaaagcggagatccacgagttcatcctgcgcaac
tggcgcatcgtcaaggtcgccaccaccaaggcacagcgcaagctcttcttcaatctgcgc
agcagcaagaagcggctcggctggttctcccgagaagaggtcgagggtgtggccgaagat
ctgggagtaaaaccagagactgtgctacagatggaagcgcgtctcgcagcccgggacctt
gccttcgatggcccgaacagcgatgacgaagatgcacccgccacaccggcgggattcctg
ccggatcacagcatggagccctcggctcagctggagtcggcagacagcgccgctcatcta
caagagcagttgggcacagccctcgaatcactggacgaacgcagccgggagattctgcag
gcgcgctggctgagcgaaaagaaggcgaccctgcatgagttggccaaacgctttggcgtc
tctgctgagcgcatacgccagatcgaaaaggctgcaatgaagaagctcaaggggcagatc
gctgcctga
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