Candidatus Endoriftia persephonae: L0Y14_02865
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Entry
L0Y14_02865 CDS
T08211
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
eps
Candidatus Endoriftia persephonae
Brite
KEGG Orthology (KO) [BR:
eps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eps03016
]
L0Y14_02865 (thpR)
Enzymes [BR:
eps01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
L0Y14_02865 (thpR)
Transfer RNA biogenesis [BR:
eps03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
L0Y14_02865 (thpR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
DUF4248
Motif
Other DBs
NCBI-ProteinID:
USF88200
UniProt:
A0A9J7A041
LinkDB
All DBs
Position
603174..603701
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AA seq
175 aa
AA seq
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MSNSRAFFALWPDLEVRRQIARVGRSLNGCGGRMLQPQDLHLTLCFLGDLDAQRRRCVET
VADSFSAAPVVLQIDRIDQFPRARILWVGPLESPPSLITLHDRLSSALQSCGFAPETRAF
TPHLTLYRKAQRVEPGRIDPPIRWQAESLTLACAVGGSSGAPSYRILNEWSLRSL
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacagccgggcctttttcgccctctggcccgacctggaggtgcgtcgacagatc
gcccgtgttggccgatccctgaacggttgtggcgggcgcatgctgcagccacaagatctg
catctgaccctctgttttttgggggatctggacgcacagcgccggcgttgtgttgagacc
gtggccgattcgttcagtgcggcgcctgttgtcctgcagatcgaccggatcgaccagttt
cctcgggcgcgtatcctctgggtcgggccgctggagtccccgccgtcactgatcacgctg
catgatcgactgagcagtgccctgcagtcctgcggttttgccccggaaacccgcgccttc
accccgcatctgaccctctatcgcaaagcccaacgggtcgagcctggcagaatcgatccg
ccgatccgctggcaagcggagagcctgaccctggcctgcgccgtcggcggctcgtctggt
gcgcccagctaccgaattctcaatgaatggtcgctaaggagtctctga
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