Candidatus Endoriftia persephonae: L0Y14_05095
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Entry
L0Y14_05095 CDS
T08211
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
eps
Candidatus Endoriftia persephonae
Brite
KEGG Orthology (KO) [BR:
eps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eps03016
]
L0Y14_05095 (truB)
Enzymes [BR:
eps01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
L0Y14_05095 (truB)
Transfer RNA biogenesis [BR:
eps03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
L0Y14_05095 (truB)
Prokaryotic type
L0Y14_05095 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
USF88609
UniProt:
A0A9J7A0X9
LinkDB
All DBs
Position
1133196..1134119
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AA seq
307 aa
AA seq
DB search
MGRGRNRGRNISGVFLLDKPEGITSNKALQEVKFFYKAAKAGHTGSLDPLATGLLPICFG
EATKLSAFLLDADKHYQVRIRLGVTTTTADAEGEVVEERDASGVSEAQIRDTLADFRGEQ
QQLPPMYSAIKHKGERLYNLARKGIEVEREPRTIHIHALELLSCELPEFELDVHCSKGTY
VRTLAEDIGKALGCGAYVSGLRRTGVGPYDGAEMVTLAELKEAWQERRFDEMDQMLLPLE
SALENWPEVVLSPDMLFYLRQGQPILVPKAPTEGWVRLYANGDEFIGVGQILDDGRVAPK
RMMQAAN
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgggacgtggtcgcaatcgggggcgcaatatcagcggtgtgttcctgctggataagccg
gaaggtattacctcgaacaaggccttgcaggaggtcaagtttttctacaaggcggcgaag
gcgggccataccggcagcctcgatccgcttgccaccggcctgttgccaatctgctttggc
gaggcgaccaagctgtcggcgtttctgctcgatgcagacaagcactaccaggtgcggatt
cggctcggggtgactaccaccacagccgatgccgagggcgaggtggttgaagagcgggat
gcctccggggtcagcgaggcgcagatccgtgacacgctcgctgactttcgcggcgagcag
caacagttaccgccgatgtactccgccatcaaacacaagggcgagcgcctctacaatctg
gcgcgtaagggtatcgaggtggagcgcgagccgcgcaccattcatattcacgcgctggag
ttactgtcgtgcgagctgcccgagttcgagctcgatgtgcactgctccaaaggcacctat
gtgcggaccctcgccgaggatatcggcaaggcattgggctgcggcgcctatgtcagcggc
ctgcggcgcaccggggttgggccctatgatggtgccgaaatggtgactctggccgaactc
aaagaggcctggcaggagcgccgcttcgatgagatggaccagatgctcctgccgctggag
agcgccttggagaactggccagaggtcgtcctctcccctgacatgcttttctacttgcgt
caggggcagccgatcctggtgccgaaggcccccactgaaggttgggtgcggctctacgcc
aatggtgacgagtttatcggtgtgggccagatcctcgatgatggtcgggtcgcccccaag
cgtatgatgcaggcagcgaattaa
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integrated database retrieval system
