Candidatus Endoriftia persephonae: L0Y14_05105
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Entry
L0Y14_05105 CDS
T08211
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
eps
Candidatus Endoriftia persephonae
Pathway
eps03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eps00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L0Y14_05105 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eps03019
]
L0Y14_05105 (pnp)
03016 Transfer RNA biogenesis [BR:
eps03016
]
L0Y14_05105 (pnp)
Enzymes [BR:
eps01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
L0Y14_05105 (pnp)
Messenger RNA biogenesis [BR:
eps03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
L0Y14_05105 (pnp)
Transfer RNA biogenesis [BR:
eps03016
]
Prokaryotic type
tRNA degradation factors
L0Y14_05105 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
OB_RRP5_4th
S1_RRP5
KH-I_KHDC4-BBP
S1_2
KH_2
Motif
Other DBs
NCBI-ProteinID:
USF88611
UniProt:
A0A9J7A0C7
LinkDB
All DBs
Position
1134603..1136702
Genome browser
AA seq
699 aa
AA seq
DB search
MTAIKKEFQWGEHKVSLETGEIARQADGAVLVNMDDTVVLATVVGAGPIPGRDFFPLTVD
YQEKTYAAGKIPGGFFRREGRPSEKEILTSRLIDRPIRPLFPKGYNSEVQVILTVKSLNP
AVDPEIPALIGASAALAISGLPFNGPVGACRVGYKDGEYILNAASTGLSADSDLDLIVAG
TEEAVLMVESEANELSEEVMLGAVLFGHEQSQIVIDTINALAAEVGKAAGEFESPTVDEA
LTAAVAEAAEVGMGDAYSIADKLERYAAADAVKEATLEKLCSAAEGEEPRWSTDEVKGAL
EKLKKRIVRGRILDGEPRIDGRDTRTVRPISVRTGVLPRTHGSALFTRGETQALVVTTLG
TERDSQIIDALEGERRESFMLHYNFPPFCVGETGRVGSPKRREIGHGRLAKRGVLACMPT
LAEFPYAIRVVSEITESNGSSSMASVCGTSLSLMDAGVPLKAPVAGVAMGLIKEDERFAV
LTDIMGDEDHLGDMDFKVAGTAQGINALQMDIKINGITKEIMEIALEQAKEGRLHILDEM
NRVISSHRGEMSEHAPRIIEIKINPDKIRDVIGKGGVTIRGITEATGATVDITDDGIVKI
FSVDKAAGEEAKKRVELITADVEVGTVYEGKVARLMDFGAFVTILPGKDGLVHISQISNE
RVEKVSDKLSEGDNIRVKVLEVDKQGRIRLSMKAVEEGE
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
gtgactgcaatcaaaaaagagtttcagtggggtgagcacaaggtctccttagagaccggt
gagatcgcacgccaggctgacggcgcggtgctggtcaatatggacgacaccgtggttctg
gccaccgtggtcggggccggcccgatcccgggtcgcgacttctttccgctgacagtggat
tatcaggagaagacctatgccgcgggcaagatccccggcggttttttccgccgcgagggg
cgcccgagtgagaaggagatcctcacctcgcgtctgatcgatcgtccgatccgtccgctg
ttccctaagggctacaacagtgaggttcaggtgatcctcaccgtgaagtccctcaatccg
gcagtggatcctgagatcccggctctgatcggcgcctccgcggcgctggccatctctggc
ctgccgttcaacggtccggtcggtgcctgccgtgtcggctacaaggatggcgagtacatc
ctcaacgccgccagcaccggcctgagcgccgattctgatctcgatctgatcgtcgccggt
accgaagaggcggtgttgatggtggagtccgaggccaatgagctctctgaagaggtgatg
ctgggcgcagtcctgttcggtcacgaacagtctcagatcgtgatcgacacgatcaatgca
ctggcggccgaggtgggcaaggccgcgggcgagtttgagtcgccgacagtggatgaagcg
ctgaccgcggcggttgccgaagcagcagaggtggggatgggtgatgcttacagcatcgcc
gacaagctggagcgctatgccgctgccgatgcagtgaaagaggcgaccctggagaaactc
tgcagcgctgctgagggcgaagagccccgctggagcaccgacgaggtcaagggcgccctg
gagaagctgaagaagcggatcgtgcgcggccgtatcctcgacggtgagccgcgcatcgat
ggtcgcgacacccgcaccgtgcgcccgatcagcgtgcgcaccggtgtgctgccgcgtacc
cacggttcggcgttgttcacccgcggtgagactcaggcgctggtggttaccaccctcggc
accgagcgcgacagccagatcatcgatgcgctggagggcgagcgccgcgagtccttcatg
ctgcactacaacttcccgcccttctgtgttggcgagaccggtcgcgttggtagccccaaa
cgtcgcgagatcggccacggtcgtctcgccaaacgcggcgtgctggcctgcatgccgacc
ttggcggagttcccctacgcgatccgagtggtctccgagatcaccgagtcgaacggctcc
tcctcgatggcatcggtgtgtggcaccagcctttcgctgatggacgccggtgtgccgctg
aaggcaccggtggccggtgtggcgatgggcctgatcaaagaggatgagcgttttgctgtg
ctcaccgacatcatgggcgacgaggatcacctcggcgacatggacttcaaagtcgccggt
accgcccagggcatcaacgccctgcagatggatatcaagatcaacggcatcaccaaggag
atcatggagatcgccctggagcaggccaaagagggacgtttgcacatcctcgacgagatg
aaccgcgtgatctcctcgcatcggggtgagatgtccgagcacgcgccgcgcatcatcgag
atcaagatcaacccggacaagatccgcgatgtgatcggcaagggtggtgtgaccatccgc
ggcatcaccgaggcaaccggtgccaccgtcgacatcaccgacgatggcatcgtgaagatc
ttctcggtggacaaggcggccggtgaagaggcgaagaagcgcgtcgagctgatcaccgca
gatgtcgaggtcggtaccgtctacgagggtaaggtcgcccgcctgatggacttcggcgcc
tttgtcaccatcctgcccggcaaggatggtctggtgcatatctcgcagatctccaacgag
cgcgtggagaaggtgagcgacaagctctccgaaggggataacatccgcgtcaaagtgctg
gaggtggataagcagggccgcatccgtctctccatgaaggcggtggaggagggggagtaa
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