Candidatus Endoriftia persephonae: L0Y14_06005
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Entry
L0Y14_06005 CDS
T08211
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
eps
Candidatus Endoriftia persephonae
Pathway
eps03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
eps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
L0Y14_06005 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eps03400
]
L0Y14_06005 (uvrB)
DNA repair and recombination proteins [BR:
eps03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
L0Y14_06005 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
L0Y14_06005 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_16
AAA_22
AAA_30
DUF7623
Kinesin
TrwB_AAD_bind
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
USF88784
UniProt:
A0A9J7A1Y4
LinkDB
All DBs
Position
1312785..1314791
Genome browser
AA seq
668 aa
AA seq
DB search
MVKQFQLASRFDPAGDQPSAIERLVEGIHDGEAGMTLLGVTGSGKTFTIANVIQQVRRPT
LVLAHNKTLAAQLYGEFKEFFPNNSVEYFVSYYDYYQPEAYVPASDTFIEKDASINEHIE
QMRLSATKALLERNDTIIVATVSAIYGLGDPRSYLSMMLHLSRGDIINQRDILQRLAELQ
YKRNDVELHRATFRVRGEVIDIYPAESDAEALRVELFDDEVERLTLFDPLTGELLRKVPR
YSIYPKSHYVTPRETLLAAVDQIKEELKGRLDQLESANKLVERQRLEQRTRFDIEMILEL
GYCSGIENYSRYLSGRGSGEAPPTLFDYLPDEALLVVDESHVTIPQIGGMYRGDRSRKET
LVEYGFRLPSALDNRPMRFDEYEARSPQTIYVSATPREYEIERSGAIVEQVVRPTGLLDP
ELEVRPATSQVDDLLSEIGQRVEQSERVLVTTLTKRMAEDLTDYLHDHDVKVRYLHSDID
TVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSEGALIQTIGR
AARNANGKAILYADEITGSMRRAIDETERRRSKQIAHNEAHGITPETIRKSVADILEGAY
PGAPGSAKRYAKVVEEQAEYAALSPRQMAKRIKALEDEMYQHARDLEFEEAARVRDKIRE
LEVQGVLA
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaacaatttcaattggcctcccgattcgacccggctggcgatcagcccagtgca
atcgagcggctggtagagggtatccacgatggtgaggcgggtatgactttgctcggcgtg
accggctcgggcaagaccttcactatcgccaacgtgatccagcaggtgcggcgtccgaca
ttggtcctggcccacaataagaccctggcggcccagctttacggcgagttcaaggagttt
ttccccaataactcagtggaatattttgtctcctactacgactactaccagcccgaggcc
tatgtgccggcctccgataccttcatcgaaaaggacgcctcgatcaacgagcacattgag
cagatgcgtctctccgccaccaaggcgctgctggagcgcaacgacaccatcatcgtcgcc
accgtctcggcgatctacggcctgggtgatccacgctcctacctgagcatgatgctgcac
ctctcccgtggtgacatcatcaaccagcgcgatatcctgcagcgtcttgctgagctgcag
tacaaacgcaatgatgtggagctgcatcgcgccaccttccgggtgcgcggtgaggtgatc
gacatctacccggctgagtcggacgccgaggcgctgcgggtggagctgttcgatgacgag
gtggagcggctcaccctgttcgacccgctcaccggcgagctgctgcgtaaggtgccgcgt
tactcgatctatccgaagagccactatgtcaccccccgcgagaccctgctggcggcggtg
gatcagatcaaagaagagctaaaggggcgtctggatcagctggagtcggccaacaaactg
gtggagcgacagcggcttgagcagcgcacccgtttcgatatcgagatgatcctggagctg
ggttactgctccggcatcgagaattactcccgctacctttccggacgtggttccggtgag
gcgccgccgaccctgtttgactacctgccggacgaggccctattggtggtggatgagagt
cacgtcaccatcccgcagatcggcggcatgtatcggggcgaccgatcgcgcaaggagacc
ctggtggagtatggctttcgtctgccctcggcgctcgacaaccggccgatgcgcttcgac
gagtatgaggcgcgctcgccccagaccatctatgtctccgccaccccgcgtgagtacgag
atcgaacgctccggcgctatcgttgaacaggtggtccgccccaccggtctactcgacccc
gagctggaggtgcgccctgccaccagccaggtcgacgatctgctctccgagatcggccag
cgggtggagcagagcgagcgggtgctggtcaccaccctgactaagcgcatggcggaggat
ctcaccgactatctgcacgatcacgatgtgaaggtgcgctatctacactccgatattgat
accgtggagcgggtggagatcatccgcgacctgcgtctcggtgagttcgacgtgctggtg
ggcatcaacctgttgcgcgaagggctcgatatgccagaggtctcgctggtggcgattctg
gatgccgacaaggagggctttctgcgctccgaaggcgcgctgatccagaccatcggccgg
gccgcgcgcaacgccaacggcaaggcgatcctctatgcggatgagatcaccggatcgatg
cgccgcgccatcgacgagaccgagcgccgccgcagcaaacagatcgcccataatgaggct
cacggcatcactccggagaccatccgcaaatcagttgccgacattctggagggagcctat
cccggtgccccggggtcagccaaacgctatgctaaagtggtggaggagcaggcggagtat
gcggccctgtcaccacggcagatggccaaacgcatcaaggcgctggaggatgagatgtac
cagcacgcgcgggatctggagttcgaggaggcggccagggtgcgcgataaaatccgtgag
ttggaagtacagggtgtgctggcatag
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