Candidatus Endoriftia persephonae: L0Y14_06020
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Entry
L0Y14_06020 CDS
T08211
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
eps
Candidatus Endoriftia persephonae
Pathway
eps00521
Streptomycin biosynthesis
eps00523
Polyketide sugar unit biosynthesis
eps00525
Acarbose and validamycin biosynthesis
eps00541
Biosynthesis of various nucleotide sugars
eps01100
Metabolic pathways
eps01110
Biosynthesis of secondary metabolites
eps01250
Biosynthesis of nucleotide sugars
Module
eps_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
eps00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
L0Y14_06020 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
L0Y14_06020 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
L0Y14_06020 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
L0Y14_06020 (rfbB)
00525 Acarbose and validamycin biosynthesis
L0Y14_06020 (rfbB)
Enzymes [BR:
eps01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
L0Y14_06020 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
Sacchrp_dh_NADP
KR
Motif
Other DBs
NCBI-ProteinID:
USF88786
UniProt:
A0A9J7A1A9
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All DBs
Position
1315982..1317076
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AA seq
364 aa
AA seq
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MAQMPARRLLVTGGAGFIGSAVIRYLINETDHHVVNLDKLTYAGNLESLAAVDGSERYAF
ERVDICDQAEVDRVFREHHPDLVMHLAAESHVDRSISGPAEFIQTNITGSYVMLEAARQY
WSGLEGPAKARFRFHHISTDEVYGDLEGTDDLFTEETPYAPSSPYSASKASSDHLVRAWN
RTYRLPVVITNCSNNYGPYQFPEKLIPLVILNAVAGKPLPIYGKGDQIRDWLQVEDHARA
LVKVALEGRDGETYNIGGHNEKTNLEVVKTLCSILDELRPEHPEGIQRYEELITYVADRP
GHDLRYAIDASKIERDLGWTPDETFESGIRKTVEWYLDNAGWVENVASGEYRKWIESNYD
KRGG
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaatgccggcacgacggttgttggttacgggcggggcgggttttatcggctcg
gcggtgatccgctatctgatcaatgagacagaccaccatgtggttaatctcgataaactc
acctacgcgggcaatctggagtcgctggctgcggtggacggcagcgaacgctacgccttc
gagcgggtcgatatctgcgaccaggcggaggtcgaccgggtgttccgtgagcatcatccg
gacctggtgatgcacctcgccgccgaatcccatgtcgatcgctcgattagcggtccggcg
gagttcattcagaccaacatcaccggcagctatgtgatgctggaggcggcgcgccaatac
tggtctggcctggagggtcccgccaaagcgcggtttcgcttccaccatatctccaccgat
gaggtctacggtgacctggaggggactgacgatctctttacagaagagaccccctacgcg
ccgagttctccctattccgcctccaaggcgagttccgatcacctggtgcgcgcctggaac
cgcacctacaggttgccggtggtgatcaccaactgctccaacaactacggcccctatcag
ttccccgagaagctgatcccgctggtgatcctcaacgcggtggctggtaagcccctgccg
atctacggtaagggggatcagatccgcgactggctgcaggttgaagatcatgcccgcgcg
ctggtgaaggtggcgctggaggggcgggatggcgagacctacaatatcggcggccataac
gagaagaccaatcttgaggtggttaaaacactctgttcgatcctcgatgagctgcgcccg
gagcaccccgagggcatccaacgctatgaagagctgatcacctacgtggctgatcgcccc
ggtcacgatctgcgctatgcaatcgatgcctccaagatcgaacgggatctgggttggacg
ccagacgagaccttcgagagcggtatccgaaagacagtggagtggtatctcgacaacgcc
ggctgggtggagaatgtggccagtggcgagtatcgcaaatggatcgagagcaactacgac
aaacgggggggatga
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