Candidatus Endoriftia persephone: L0Y14_06760
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Entry
L0Y14_06760 CDS
T08211
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
eps
Candidatus Endoriftia persephone
Brite
KEGG Orthology (KO) [BR:
eps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eps03032
]
L0Y14_06760
03036 Chromosome and associated proteins [BR:
eps03036
]
L0Y14_06760
03400 DNA repair and recombination proteins [BR:
eps03400
]
L0Y14_06760
DNA replication proteins [BR:
eps03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
L0Y14_06760
Chromosome and associated proteins [BR:
eps03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
L0Y14_06760
DNA repair and recombination proteins [BR:
eps03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
L0Y14_06760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-DNA_bdg
HU-CCDC81_bac_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
USF88924
UniProt:
A0A9J7A1X2
LinkDB
All DBs
Position
1487178..1487504
Genome browser
AA seq
108 aa
AA seq
DB search
MTKSELIEIIAKDQSHLAYRDIELAIKCMIEQMSQALSSGERIEIRGFGSFSLHYRPPRM
GRNPKTGMTVALSGKYVPHFKPGKELRERVNRVATEVSDPSLASGNNP
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atgactaaatccgagttgatcgaaattattgccaaagatcagagtcacttggcgtatcgt
gatatagagcttgccatcaagtgcatgatcgagcagatgagccaggctctctcctccggg
gagcggatagagattcgtgggtttggtagtttctctcttcactaccgtccacccaggatg
ggccgtaatccaaaaacgggtatgaccgtcgccctgtctggcaaatatgtcccccatttc
aaacccggcaaggagttgcgcgaacgcgttaacagagttgccaccgaagtcagtgatccc
tcgctggcgagcggtaacaatccataa
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integrated database retrieval system
