Candidatus Endoriftia persephonae: L0Y14_08595
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Entry
L0Y14_08595 CDS
T08211
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
eps
Candidatus Endoriftia persephonae
Brite
KEGG Orthology (KO) [BR:
eps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
eps03009
]
L0Y14_08595 (dbpA)
Enzymes [BR:
eps01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
L0Y14_08595 (dbpA)
Ribosome biogenesis [BR:
eps03009
]
Prokaryotic type
rRNA helicases
L0Y14_08595 (dbpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
AAA_30
AAA_19
Helicase_C_2
CMS1
AAA_22
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
USF86212
UniProt:
A0A9J6ZTV3
LinkDB
All DBs
Position
complement(1927385..1928773)
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AA seq
462 aa
AA seq
DB search
MSQTDFSSLKLHPALLKNLSTLGYLAMTPIQAQSLPHILDGKDVIAQGKTGSGKTAAFGL
GLLEKLDVKRFRVQSLVLCPTRELADQVAKEVRKLARSIHNIKVLTLCGGMPFGPQIGSL
EHGAHIIVGTPGRVEEHLRKGTLRLDSLNMLVLDEADRMLDMGFQPALDAIIKYTPQQRQ
TLLFSATYPSQIESIAQRIMIHPVVVQVAATHDSTSIQQYFYRVDANTQRMTILQLLLLK
YRPESALVFCNTKRETQEVADELHDLGFSALALHGDLEQKARDQTLVRFANKSASILVAT
DVASRGLDIDALDAVINYHLSRELEVHVHRIGRTGRAGSKGIACTLYNDKERYKVEALEE
YLDQRIVASPLPPFSLLEQPTYKPPMVTLQIDGGKKQKVRPGDILGALTGKNGIAGKQVG
KIHIFDNWAYVAVSGDAAQTALIKLGEGKLKGRSFRVRRIRG
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
ttgagccaaactgacttttcatccctcaagctgcatcccgccctgcttaagaatctctct
accctgggttatctggccatgacgcccatacaggcgcagagcttgccgcatattctggat
ggcaaagatgttatcgcgcaggggaaaacaggctcaggaaaaaccgcggcattcggtctg
ggtttattggaaaagcttgatgtaaagcgctttcgtgtgcagtcactggtactttgcccg
actcgggaactggccgaccaggtggccaaagaggttcgcaaactggctagaagcatccac
aacatcaaggttctcactctttgtggcggcatgccctttgggcctcagattggctcactg
gaacacggtgcgcacatcattgtagggacacccgggcgagtggaagagcacctgcgaaaa
ggtacgctgaggctggatagtttaaacatgcttgtgttggatgaggcggatcgcatgctc
gacatgggcttccagccagctctggatgccatcatcaagtacactccacagcagcgacaa
accctgttattcagcgcaacctatccctctcaaatagagtctattgctcaacgcatcatg
atccacccggtagtggtgcaagttgctgctacccatgacagcaccagtattcagcagtac
ttctacagagtcgatgccaatacacagcgtatgaccatcctgcagctgctgctactgaaa
tatcgacctgaatccgccctggtattttgtaataccaagcgggagactcaggaagtggct
gacgagttacatgaccttggctttagtgcgctggcattgcatggcgacctggaacaaaaa
gcccgtgatcaaaccctagtgcgctttgccaacaaaagcgcctcgatactggttgccacc
gatgtggcctcccgcggcctagacatcgacgctttggacgccgtcatcaactaccatctc
tcccgtgagttagaggtgcatgttcaccgtatcggtcgcaccggacgcgcaggcagcaaa
ggcatcgcctgtactttgtataatgacaaagagagatacaaagttgaagcactggaagag
tacctagatcagcgcattgttgcctcgcccttgccgccattcagcttgctggagcaaccc
acctataagccacccatggtgaccctacaaattgatggtggcaaaaagcagaaagtgaga
cccggcgatattctcggcgcactcacaggaaaaaacggcattgctggtaaacaggtcggc
aaaattcatattttcgataactgggcttatgtggccgtcagtggagatgcggctcaaacg
gcattaataaaattaggcgagggaaaactgaaggggcgttcgtttcgtgtgagacggata
cgggggtag
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