Candidatus Endoriftia persephonae: L0Y14_09055
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Entry
L0Y14_09055 CDS
T08211
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
eps
Candidatus Endoriftia persephonae
Pathway
eps03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
eps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
L0Y14_09055 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eps03400
]
L0Y14_09055 (xthA)
Enzymes [BR:
eps01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
L0Y14_09055 (xthA)
DNA repair and recombination proteins [BR:
eps03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
L0Y14_09055 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
USF86296
UniProt:
A0A9J6ZUB4
LinkDB
All DBs
Position
complement(2026885..2027700)
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AA seq
271 aa
AA seq
DB search
MKIVSFNTNGIRTREHQLQQLKQRHDPDVIGIQESKVQDQDFPLEMTSALGFNAAYFGQK
THYGVALLSKQAPLSLQKGFPGDPVDAQRRMIIGRFATDKGNQVTVINGYFPQGENQSHE
VKYPAKRKFYADLLVYLQQHHSPDDNLLVIGDMNIAPLDLDIGIGPDNAKRWLKSGKCCF
LPEEREWLQRLTDWGLHDTFRGHYPEVDDRFSWFDYRSRGFDREPKRGLRIDLILASASL
NAACSDAGIDYEIRGMQKPSDHCPIWAEFDI
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgtctcattcaacaccaacggcatccgtactcgcgagcaccagctgcagcag
ctgaaacagcgtcatgatccggatgtgatcggtatccaggagagcaaggtccaagaccag
gacttcccgctggagatgaccagcgcgctgggtttcaacgccgcctactttggccagaag
acccattacggcgtggcgctgctctcgaagcaggcgccgttgtcgctgcagaagggcttc
cccggcgacccggtggacgcccaacggcgcatgatcatcggccgttttgccactgacaag
ggcaatcaggtgacggtcatcaatggttacttcccgcagggtgagaaccagtctcacgag
gtcaaatatccggctaagcgcaagttctacgccgatctgctcgtctatctgcaacagcat
cacagcccagacgacaatctgctggtgatcggcgatatgaacatcgcaccgctcgacctc
gacatcggcatcggtccggacaacgctaaacgctggctgaagagcggcaagtgctgtttt
ctgccagaggagcgggagtggctgcagcggctcacggattggggcctgcacgataccttc
cgcggccactatcccgaggtggatgaccgcttcagttggttcgactaccgcagtcgcggc
ttcgaccgcgaacccaagcgcggtctgcgcatcgatctaatcctggccagtgccagcctt
aatgccgcttgcagcgatgccggcatcgactatgagatccgtggcatgcagaagccttcc
gaccactgcccgatctgggccgaatttgatatctga
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