Candidatus Endoriftia persephonae: L0Y14_10120
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Entry
L0Y14_10120 CDS
T08211
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
eps
Candidatus Endoriftia persephonae
Pathway
eps03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
eps00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
L0Y14_10120 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eps03019
]
L0Y14_10120 (orn)
03009 Ribosome biogenesis [BR:
eps03009
]
L0Y14_10120 (orn)
Messenger RNA biogenesis [BR:
eps03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
L0Y14_10120 (orn)
Ribosome biogenesis [BR:
eps03009
]
Eukaryotic type
Pre-60S particles
RNases
L0Y14_10120 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
USF86496
UniProt:
A0A9J6ZUY7
LinkDB
All DBs
Position
complement(2252410..2252958)
Genome browser
AA seq
182 aa
AA seq
DB search
MLQNPNNLIWIDLEMTGLDTLNDEIIEIATIVTDSDLNLLAEGPVIAISQPQPLLDGMDE
WNQRQHGGSGLLKRVRESSYNEAKAEAETIAFLEQYVPPGVSPMCGNSICQDRRFMARTM
PKLEAYFHYRNLDVSSLKELVNRWAPAVAEGFTKNAQHLALEDIKDSIAELSHYREKFLR
LS
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaaaaccccaataacctgatctggatcgatctggagatgaccggcctggacacc
ctcaatgacgagatcatcgagatcgccactatcgtcaccgattccgatctgaatctgttg
gcagaggggccggtgatcgcgatcagccagccgcagccgttgttggacggcatggatgag
tggaaccagcgccagcacggtggctctggcctgctcaagcgggtgcgtgagagcagctac
aacgaggcgaaggccgaggcggagacaatcgcctttctggagcagtatgtgccgcctggg
gtctcgcccatgtgcggcaacagcatctgccaggatcggcgattcatggcccgtaccatg
ccgaagctggaggcctatttccactaccgcaatctggatgtgagttcgctgaaggagctg
gtcaatcgctgggcgccggcggtggcggagggcttcaccaaaaacgcgcagcatctggcg
ctggaggatatcaaagactcgatcgccgagctgagccactaccgtgagaagtttctgcgc
ctaagctga
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