Candidatus Endoriftia persephonae: L0Y14_11020
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Entry
L0Y14_11020 CDS
T08211
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
eps
Candidatus Endoriftia persephonae
Pathway
eps02020
Two-component system
eps02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
eps00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
L0Y14_11020
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
L0Y14_11020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eps03000
]
L0Y14_11020
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
eps02035
]
L0Y14_11020
Transcription factors [BR:
eps03000
]
Prokaryotic type
Helix-turn-helix
Other families
L0Y14_11020
Bacterial motility proteins [BR:
eps02035
]
Flagellar system
Flagellar assembly proteins
Others
L0Y14_11020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
FleQ
HTH_8
AAA_5
AAA_16
HTH_50
bpMoxR
nSTAND3
OKR_DC_1_N
AAA
AAA_30
AAA_19
AAA_7
HTH_30
Response_reg
Motif
Other DBs
NCBI-ProteinID:
USF86667
UniProt:
A0A9J6ZUY2
LinkDB
All DBs
Position
complement(2457676..2459148)
Genome browser
AA seq
490 aa
AA seq
DB search
MGQSAKRAGQAFPKLCAYLIDDDEARREYLEHILSFLDARLHRVKSYQDIKNHVEAEKEA
CSAVLVSPHYCQGEGREMIEALEKQMPDLPVFQIFGEENPTSTEGCENVIGQLQIPTHYD
ELMALIHKAQVFQESRRNGDHVTARSVELFRCLSGSSRATHQINKMIDQVADSEATVLIL
GESGTGKEVVARKLHFHSKRRGKPFVPVNCGAIPADLLESELFGHEKGAFTGAISSRQGR
FEMAEGGTLFLDEIGDMSMPMQVKLLRVLQERSFERVGSNKPIKSNVRILAATHRNLEKA
IEDNSFREDLYYRLNVFPIEMPPLRARVEDIPVLVTDLIRRIENEKRGSVRLTPAAVAAL
SHYRWPGNVRELANLIERLAILYPYGVVDVADLPDKFRPVGNLVDTVQLPEVAIRGSEPD
TVVHAPRLPNEGIDLKAHLSTLEQSLIQQALDESEGVVAHAAKRLHMRRTTLVEKLRKYG
LQRQTESTGI
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggggcagtcggcaaaacgagcagggcaggcgtttcccaaattgtgtgcctatctgata
gatgatgatgaggctcgtcgagagtacctggagcatattctctcatttctggatgcccgt
cttcaccgggtgaaatcctatcaagacatcaaaaaccatgtggaggcggagaaagaggcc
tgttcagcggtactggtcagccctcattactgccagggtgaagggcgggagatgatcgag
gcgctggagaagcagatgccggatctgccggtatttcagatttttggtgaggagaacccg
actagtactgagggttgtgaaaacgttatcggtcaactacagattcccacccactatgac
gagttgatggcgctgatccacaaggcccaggtgtttcaggagagtcgaagaaatggcgac
catgtcaccgcccgttcggtggaactgttccgttgtctctccggtagcagccgggcgacg
caccagatcaacaagatgatcgatcaggtggcggactccgaggccaccgtgctgatcctg
ggcgaatcgggcactggcaaggaggtggtggcgcgcaagctccacttccactccaagcgg
cgcggcaaaccctttgtgccagtcaactgcggcgcaatccctgctgacctgctcgagagt
gagctgtttggccatgagaaaggggcctttaccggcgccatcagcagccgccagggtcgg
tttgagatggcagaggggggcaccctgtttcttgatgagatcggtgacatgagcatgccg
atgcaggtcaagctgttgcgggttctgcaggagcgtagcttcgagcgggtcggcagtaac
aaaccgatcaagagcaacgttcggatcctcgccgcgacccatcggaacctggaaaaggcg
attgaagacaatagcttcagagaagatctctactatcggttgaatgtctttccgatcgaa
atgccgccactgcgcgcgcgcgtcgaggatatcccggtgctggttaccgacttgatacgc
cgcattgagaacgagaagcggggctcggtgcggctgacccccgctgcagtcgcggcgctg
agtcactaccgttggcccggcaacgtgcgggagctagccaacctgatcgagcggctggcg
atcctctacccctatggcgtggttgacgtggctgatctgcccgacaaattccgtccggtc
ggcaacctggtggatactgtgcagttgccggaagtggcgatcagagggagtgagccggat
actgtggtgcatgccccgcgcctgcctaatgagggcatcgacctgaaggcgcacctgagc
accctggagcagagcctgattcagcaggcactggatgagtcggaaggtgtggtcgcccat
gccgccaagcggcttcacatgcgccgcaccacactggtggagaagctacggaaatatggc
ctgcagcgccagactgagtcgacaggaatttga
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