Candidatus Endoriftia persephonae: L0Y14_11415
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Entry
L0Y14_11415 CDS
T08211
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
eps
Candidatus Endoriftia persephonae
Pathway
eps03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eps00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L0Y14_11415 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eps03019
]
L0Y14_11415 (recQ)
03400 DNA repair and recombination proteins [BR:
eps03400
]
L0Y14_11415 (recQ)
Enzymes [BR:
eps01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L0Y14_11415 (recQ)
Messenger RNA biogenesis [BR:
eps03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
L0Y14_11415 (recQ)
DNA repair and recombination proteins [BR:
eps03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
L0Y14_11415 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
DNA_pol_A_exoN
Motif
Other DBs
NCBI-ProteinID:
USF86741
UniProt:
A0A9J6ZVH8
LinkDB
All DBs
Position
2537873..2539699
Genome browser
AA seq
608 aa
AA seq
DB search
MSAADQALEILRETFGYQQFRGQQAEIIQQLSEGGDALVIMPTGGGKSLCYQIPSLLRDG
VGIIVSPLIALMQDQVAALNELGIQAAFLNSTLEPQAAAQIETELRSGTLDLLYLAPERL
LQPRTLKLLAQSPIALFAIDEAHCVSQWGHDFRPEYIQLSLLQERFPQIPRIALTATADE
TTRREIATRLGLEQAPQFVSGFDRPNIRYHIGQHERQRDALWQFLQREHPSDAGIVYCLS
RKKVESVSEWLSNKGRSALPYHAGLPHQLREQHQARFLKEEGVIIVATIAFGMGIDKPDV
RFVAHLDLPKSIEAYYQETGRAGRDGESANAWMSYGLQNVITLRQMIEQSDAPEAQQTVE
RRKLDAMLGLCEITSCRRQALIAYFDDQLDAACGNCDNCLLPPETWDASEAAQKALSAVY
RTGQRFGVNYLIDVLHGADSERIRNFGHQQLSVYGIGKEFSGPEWRSIFRQLVVRGLLAV
DIQGYGGLRLTEQARPVLRGETRLDLRRERKPEKIKKKKVQRRFSDPADLELWEDLRTLR
KELAEEQGVPPYVIFHDATLAEMVIWRPETPAALLNIDGVGQAKLEHYGEEFLELIRQAE
PAAPETHH
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgctgatcaggccctggagatcctccgcgagaccttcggctaccagcagttc
cgcggccagcaggccgagatcatccagcagttgagcgaaggcggcgacgcgctggtgatt
atgcccaccggcggcggcaaatccctctgctaccagatcccctcactgctccgcgacggc
gtcggcatcatcgtctcaccgctgattgcgctgatgcaggatcaggtggcggcgctcaac
gagctcggcatccaggctgccttcctcaactcgaccctggagccacaggccgccgcccaa
atcgagaccgagctgcgctcaggcactctcgacctgctctacctggcgccagagcgcttg
ctgcagccccgcaccctgaagctgctcgcacagagtccgatcgccctgttcgccatcgac
gaggcccactgcgtctcccagtggggtcacgacttccgccctgaatatatccagctctcg
ctactgcaggagcgtttcccacagatcccgcgcatcgccctcaccgccaccgccgacgaa
accacccgccgagagatcgccacacgactcggcctcgagcaggcaccacagtttgtcagc
ggcttcgaccgtcccaacatccgctaccatatcggccaacatgagcgtcaacgcgacgcc
ctctggcagtttctgcagcgtgaacaccccagcgatgcaggcatcgtctactgcttgtca
cgcaagaaggtcgaatcggtcagcgaatggctcagtaacaaggggcgcagcgccttgccc
tatcacgctggactgccgcaccagctgcgagaacagcatcaggcgcgctttctcaaggaa
gaaggggtgatcatcgtcgccaccatcgccttcggcatgggcatcgacaagcccgacgtg
cgcttcgtcgcccatctcgacctgcccaagagcatcgaggcctactatcaggagacaggt
cgcgccggtcgcgatggtgagtccgccaacgcctggatgagctacggcttgcagaacgtc
atcaccctacgacagatgatcgaacagtccgacgccccggaggctcaacagacagtggag
cggcgcaagctcgatgcaatgctcggcctgtgcgagattaccagctgccgccgtcaggca
ctgatcgcctacttcgacgaccaactggatgccgcctgcggcaactgtgacaactgccta
ctaccgcccgagacttgggacgccagcgaggcggcgcagaaggccctctccgctgtctac
cgcaccggccagcgcttcggcgtcaactacctgatcgacgtgctgcatggcgccgacagc
gaacgcatccgcaacttcggtcaccagcagctctcagtctacggcatcggcaaggagttc
agcggtccagaatggcgttcaatcttcagacagctagtggtacgcggcctgctggcggtc
gacatccaaggttacggcggcctgcgcctcaccgagcaggcccgaccagtgctgcgcggc
gagacccggctcgatctgcgccgcgaacgaaagcccgagaagatcaaaaagaaaaaggtg
cagcggcgcttcagtgacccagccgacctagagctgtgggaggatctacgcaccctacgc
aaggagctggccgaggagcagggggtaccgccctacgtgatcttccacgacgccaccctg
gcagagatggtgatctggcgcccggagacccccgccgcgctgctcaacatcgacggcgtc
ggccaagccaaactggaacactatggggaggagttcctcgagctgatccgccaggccgaa
ccggcggctcccgagacccatcattga
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