Candidatus Endoriftia persephonae: L0Y14_13180
Help
Entry
L0Y14_13180 CDS
T08211
Name
(GenBank) lytic transglycosylase F
Organism
eps
Candidatus Endoriftia persephonae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_3
SLT
Lig_chan-Glu_bd
Motif
Other DBs
NCBI-ProteinID:
USF87080
UniProt:
A0A9J6ZX14
LinkDB
All DBs
Position
2938738..2940195
Genome browser
AA seq
485 aa
AA seq
DB search
MSIFSKTASLFLPLFLLCIPHLSAREANGLSALQPANQPFTDDLPAMQQRTAIRVLVNHN
RTNFFLHDGRHQGFEFELMEQYRKHLNQEKKNNQIATSFIYIPLPFEQLLPALIEGRGDV
VAAGMTITPQRRQLVDFTAPYLPNVQEILVASDKAKPVDKLEDLAGQRVHLLRGSSYVDH
LRALNQRFKQAHIEPIKLVEVDSHLQTEDLLEMLSAQVIDYTFADDHIATIWARLLPNLV
LHRTLQIHSGGKIAWAVRKENPKLRASLNDFIGKIKKGTLLGNMLFQRYYRNTRWIKNPL
QPGEQDKLMRVRGLMEKYATQYHFDWLTIAAQAYQESGLDQSKRNPSGALGIMQIRPTTA
ADTMVAITSIEQLENNIHAGVKYLAWIRDRYFSDAEILPQDRLFFSLAAYNAGPAKVRRM
RDKAKAMGLDSNRWFGNVEQAALRLVGQETVRYVRNILKYYTAYRLAFDLQDASQAAIKE
QTSVK
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgatattcagcaaaacagcgtctctttttctgccgctttttttactctgcatcccc
cacctgtcggccagggaggcaaacggactttctgccctgcagccagccaaccagcctttc
actgatgatctgccggcgatgcagcaacgcaccgccatccgcgtcctggtcaaccacaac
cgcactaattttttcctgcacgatggacgccaccaaggctttgaattcgaactgatggag
cagtaccgcaaacacctcaatcaggagaagaaaaacaaccagatcgcgaccagctttatc
tacatcccactccctttcgagcagctgctgccagcgctgatcgagggacgcggtgatgtc
gttgccgccggtatgacgatcacaccacagcgccgtcagctggtcgatttcaccgcgccc
tacctgcccaatgtgcaggagattctggtcgcttcagacaaggcgaaaccggttgataag
ttagaggatctggccgggcagcgggttcacctgctgcgaggcagcagctatgtcgatcat
ctgcgagcgctaaaccaacgtttcaaacaggctcatatcgaaccgatcaaactggttgag
gttgactcgcatctgcagacggaagacctgctcgagatgctcagtgcccaggtgatcgac
tacacgtttgccgacgaccacatcgccaccatctgggcaagactgctgccaaacctggtg
ctgcaccgcaccctgcagatccacagtggcgggaagatcgcctgggcggtacgcaaagaa
aacccgaaactgcgcgccagcctgaacgatttcatcggcaagatcaaaaagggcaccctg
ctcggcaacatgctgtttcaacgctactatcgcaacacccgctggatcaaaaacccgctg
cagccgggcgagcaggacaagctgatgcgggtgcgcggtctgatggagaagtacgccaca
cagtaccacttcgactggctcaccatcgccgcccaggcctatcaggagtcagggctcgac
cagagcaaacgcaacccctcgggggcgttgggcatcatgcagatccgaccgaccaccgct
gccgacacgatggtcgcaatcacaagcatcgagcagctggagaacaacatccatgccggc
gtgaagtacctggcctggatccgggatcgctacttcagcgatgccgagatcctgccgcag
gatcggctcttcttcagtctcgcagcctacaacgccggcccggccaaggtgcggcgcatg
cgcgacaaagccaaggcgatgggtctcgactcgaaccgctggttcggcaacgtggagcaa
gcggcgttgcgcctggtcggacaggaaacggtgcgatatgtgcgcaacatcctcaaatac
tacaccgcctaccggcttgcatttgacctgcaggatgcctcacaggcagccataaaagaa
cagacttctgtcaaataa
DBGET
integrated database retrieval system
