Candidatus Endoriftia persephonae: L0Y14_14190
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Entry
L0Y14_14190 CDS
T08211
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
eps
Candidatus Endoriftia persephonae
Pathway
eps02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
eps00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
L0Y14_14190
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
eps02022
]
L0Y14_14190
02035 Bacterial motility proteins [BR:
eps02035
]
L0Y14_14190
Two-component system [BR:
eps02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
L0Y14_14190
Bacterial motility proteins [BR:
eps02035
]
Pilus system
Twitching motility proteins
L0Y14_14190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
HTH_23
HTH_30
AAA_16
HTH_50
AAA_22
HTH_20
AAA_19
AAA
HTH_28
AAA_7
AAA_PrkA
Pre_tape_measure
nSTAND6
Motif
Other DBs
NCBI-ProteinID:
USF87268
UniProt:
A0A9J6ZWR5
LinkDB
All DBs
Position
3148327..3149673
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AA seq
448 aa
AA seq
DB search
MTQPLALVVDDEPDICELLEITLMRMGIETRAALNLAQAHQHLAGEHFDLCLTDMRLPDG
NGIELVRHISQHHPALPVAMITAHGNMESAIEALKAGAFDFVSKPVDLAILRKLVEKALK
LSPERQTAAPTASDADAGRQLLGNSRAMQRIRELVQKLARSQAPVYISGESGTGKELVAR
MIHDQGPRADQEFVAVNCGAIPQELMESELFGYMKGSFTGASSDRQGLFQAADGGTLFLD
EVADLPLQMQVKLLRAIQEKRVRPVGGHREVSVDVRIISATHKNLSEMVENGSFRQDLFY
RINVIELPLPPLRERPEDIPLLIDSIFTRLCSNSELPSPCLSPDALQALQRHPFPGNVRE
LENILERAITLCEGDQLSARDLQLPEVNTEPTRRTSKPLGDMLGDIERQAIIKALEETRW
NRTAAARKLGMSLRSLRYRLSKLGLDRD
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagccgttggcgctggtcgtggatgacgaacccgacatctgcgaactactggag
atcaccctgatgcgtatgggcatagagacccgtgccgcactcaacctcgcccaggcccat
caacatctcgccggcgagcacttcgatctctgcctcaccgacatgcgcctgcccgacggc
aacggcatcgagctggtgcgccacatcagccaacaccacccggccctgccggtggcgatg
atcaccgcccacggcaacatggagtcggcgatcgaggcgctgaaggccggggccttcgac
ttcgtctccaagccggtggatctggcgatcctgcgcaaactggtagagaaggcgctcaag
ctctcacccgagcgccaaacagccgcgccgacagcctctgatgcagatgccggcaggcaa
ctgctcggcaactcccgcgcgatgcagcggatccgcgagctggtacagaaactcgcccgc
agccaggcgccggtctacatcagcggcgaatcgggcaccggcaaggaactggtggcgcgc
atgatccacgaccaaggtccccgcgccgaccaagagtttgtcgcggtcaactgcggcgcc
atccctcaagaactgatggagagcgaactgtttggttatatgaaggggagcttcaccggc
gccagcagcgaccggcagggactgttccaggccgccgacggcggcaccctgtttctcgac
gaggtggccgatctaccgctgcagatgcaggtcaaactgctgcgggcgatccaagagaag
cgagtgcgcccggtgggcggccaccgggaggtctcggtggatgtgcgcatcatcagcgcc
acccataaaaatctcagcgagatggtggagaacggcagctttcgccaagacctcttctac
cgcatcaacgtgattgagctgccgcttccgccgctgcgagagcgtccggaggatatcccg
ctactgatcgacagcatttttacccgcctctgcagcaactcggagctgccgtcgccctgt
ctcagcccggatgcgctgcaagcgttgcagcgccaccctttccccggcaacgtacgtgaa
ctggagaacattctggaacgggcgatcaccctctgcgagggtgaccagctgagcgctcgc
gacctacagcttcccgaggtcaacacagagcccaccaggcgaaccagcaaaccccttggc
gacatgctgggggatattgaacgtcaggcgatcatcaaagccctggaggagacccgctgg
aaccgcaccgctgcagccaggaaactcggcatgagcctaagatcgctgcgttatcggctc
tccaagcttgggctggacagggactaa
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