Enterobacter pasteurii: HWQ17_12290
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Entry
HWQ17_12290 CDS
T09666
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
ept
Enterobacter pasteurii
Pathway
ept03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ept00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HWQ17_12290 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ept03019
]
HWQ17_12290 (rhlB)
Enzymes [BR:
ept01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HWQ17_12290 (rhlB)
Messenger RNA biogenesis [BR:
ept03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HWQ17_12290 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CCDC138_C
ERCC3_RAD25_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QLA68351
LinkDB
All DBs
Position
2578408..2579676
Genome browser
AA seq
422 aa
AA seq
DB search
MSKTHLTEQKFSDFALHPKVIEALETKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT
MAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAQATGLKLGLAYG
GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR
WLFRRMPAADQRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSN
EEKMRLLQTLIEEEWPDRAIIFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILE
EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA
CEEYALNLPAIETYIGHSIPQSKYNPDALLSELPPPKRLTRPRSGNGPRRSGGAPRNRRR
SG
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacacatttaacagaacagaagttttccgacttcgccctgcacccgaaggtg
atcgaagcccttgaaacaaaagggtttcataactgcacgcccattcaggctctcgccctg
ccgctgacgctggccggtcgcgacgttgcagggcaggcgcaaaccggtaccggcaaaacg
atggcgtttttaacgtcaacgtttcattatttactttctcacccggcgattgcagaccgc
aaagttaaccagccgcgcgcgctaattatggccccgacgcgagaactggcggtacagatc
cacgcagacgctgagcctctggcgcaagccaccggcctgaaactcggcctggcttatggc
ggggacggctacgataagcagctgaaggtgctggaaagcggcgtggatatcctgattggg
accactggccgtcttatcgactacgccaaacagaaccatatcaacctcggcgcaatccag
gtggtggtgttggatgaagcagaccgcatgtacgatttgggcttcatcaaagacatccgc
tggctgttccgccgtatgcctgccgcagaccagcgtctgaacatgctgttctctgcaacc
ctgtcataccgcgtgcgtgaactcgcattcgagcagatgaacaacgccgaatatgtagaa
gtggaaccggagcagaaaaccggtcaccgcattaaagaagagctcttctatccatctaat
gaagagaaaatgcgcctgctgcaaacgctgatcgaagaagagtggccggatcgcgccatt
atctttgcgaacaccaagcaccgctgtgaagatatctggggccacctggcggcagatggt
caccgcgtaggcctgctgaccggcgacgttgcgcagaaaaaacgccttcgtattctcgaa
gaatttacccgcggcgacctcgatattctggtcgcaaccgacgtggcggcccgtggcctg
catattccagccgtgacgcacgtctttaactacgacctgccagacgactgcgaagactat
gtacaccgtattggtcgtaccggtcgtgcgggcgcaagcggtcactctattagcctcgcg
tgtgaagagtatgcgctgaatcttccggccattgagacctatatcggtcactctattccg
cagagcaaatacaacccggacgcgctgttaagcgagctgccgccgcctaagcgcctgacc
cgcccgcgctccggcaatggcccgcgtcgttccggcggcgcaccgcgtaatcgtcgtcgt
tcaggttaa
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