Enterobacter pasteurii: HWQ17_18125
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Entry
HWQ17_18125 CDS
T09666
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
ept
Enterobacter pasteurii
Brite
KEGG Orthology (KO) [BR:
ept00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ept03009
]
HWQ17_18125 (rlmD)
Enzymes [BR:
ept01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
HWQ17_18125 (rlmD)
Ribosome biogenesis [BR:
ept03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HWQ17_18125 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
PCMT
RrnaAD
Cons_hypoth95
MTS
Methyltransf_11
TRM5-TYW2_MTfase
Methyltransf_15
Methyltransf_4
UPF0020
Ubie_methyltran
Methyltr_RsmB-F
Methyltransf_12
FtsJ
Methyltransf_23
Methyltransf_32
PrmA
TPMT
DUF4770
Methyltrans_SAM
CMAS
Motif
Other DBs
NCBI-ProteinID:
QLA69417
LinkDB
All DBs
Position
3791091..3792389
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AA seq
432 aa
AA seq
DB search
MAQFYSAKRRVTTRQIITVEATDLDPFGQGVARHNGKTLFITGLLPGERAEITLTEDKRQ
YARGQVKRRLGDSPDRVTPRCPHFGVCGGCQQQHASTELQQKSKSSALARLLKHDVSDVV
ADQPWGYRRRARLSLSYQPKTGRLEMGFRKAGSSDIVNIARCPVLVPHLEALLPDVHHCL
ASLDGVRSLGHVELVLANNGPLMVLRHTAPLSKKDREKLERFSHSHELALFLAPQSEILE
QVTGEAPWYASDGLRLTFSPRDFIQVNDGVNQQMVANALAWLDVQPTDRVLDLFCGMGNF
TLPLARRAESVVGVEGVEALVAKGQENAQQNGLQNVTFFHQNLEEDVTQQPWAKQGFDKI
LLDPARAGAPGVMQHIIKLAPERVVYVSCNPATLARDSEALLSGGYQIRRLAMLDMFPHT
GHLESMVLFEHI
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaattctactctgcaaaacgacgcgtgacgacgcgtcagatcataactgttgaa
gccacggacctcgatcctttcggacagggggtggcgcgtcacaatggtaagaccctgttt
atcacaggtttgctgccgggtgaacgagcagaaattacgctgacggaagacaaacgccag
tacgcgcgcggccaggtcaagcgccgtcttggtgatagcccggatcgcgtaacgcctcgc
tgcccccattttggcgtctgcggcggctgtcagcaacagcatgccagcacagaattacag
caaaaaagtaaaagcagcgcgctggctcgcctgctaaaacacgacgtcagtgacgttgtt
gctgaccagccgtggggctaccgccgccgcgctcgcctgagcctcagctatcagccaaaa
accgggcggctggagatgggttttcgtaaagccggctccagcgatatcgtcaatatcgcg
cgttgccctgttttggtgccccatcttgaggcactgcttccggacgtgcaccactgtctt
gcatcgctggatggcgtgcgttcgctgggccatgtcgaactggtgctggcaaacaacggt
ccgctgatggtgctgcgccataccgcgccgctgtcgaagaaagatcgcgaaaaactggaa
cgcttttcgcattctcacgagcttgcgcttttcctcgcgccgcagagcgagatacttgag
caggtaacgggagaagccccctggtatgcgtcagacgggctacgcttaacgttcagcccg
cgggattttatccaggttaacgacggcgtaaaccagcagatggtagcaaacgcgctggcg
tggcttgacgtacagccaaccgatcgggtgctcgatctgttctgcggtatggggaacttc
accctgccgctggcccgcagagcagagagcgtggtcggggtggagggcgttgaggcgctg
gtggcgaaaggccaggagaacgcccaacagaacgggttgcaaaatgtgacattctttcat
caaaatctggaggaagatgtcacgcagcaaccgtgggctaagcagggcttcgataagatc
ctgctcgatccggcgcgcgcgggtgcgccgggcgtgatgcaacatataattaaactcgcg
cctgaacgcgtggtctatgtttcctgtaatccggcgacgcttgcccgggacagtgaagca
ttattaagcgggggttaccagattcggcgtctggcaatgctggacatgttcccgcacact
ggacatctggaatcgatggtgttgtttgagcacatctaa
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