Enterobacter pasteurii: HWQ17_19215
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Entry
HWQ17_19215 CDS
T09666
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
ept
Enterobacter pasteurii
Brite
KEGG Orthology (KO) [BR:
ept00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ept03009
]
HWQ17_19215 (srmB)
Enzymes [BR:
ept01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HWQ17_19215 (srmB)
Ribosome biogenesis [BR:
ept03009
]
Prokaryotic type
rRNA helicases
HWQ17_19215 (srmB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UvrD-helicase
AAA_22
AAA_11
CMS1
DUF561
Motif
Other DBs
NCBI-ProteinID:
QLA69617
LinkDB
All DBs
Position
complement(4023199..4024527)
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AA seq
442 aa
AA seq
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MTVTTFSELELDESLLNALESKGFTRPTAIQAAAIPPALEGRDVLGSAPTGTGKTAAYLL
PVLQHLLDFPRKKSGPPRILILTPTRELAMQVAEHARELAANTHLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRW
RNQTMLFSATLEGDAIKDFAERLLEDPVEVSATPSTRERKKIHQWYYRADNLEHKVELLK
HLLKQEDATRSIVFVRKRERVHELAEMLRNAGINNCYLEGEMAQVKRTEGIKRLTDGRVN
VLVATDVAARGIDIPDVSHVINFDMPRSGDTYLHRIGRTGRAGRKGIAISLVEAHDHLLL
QKIGRYVDEPLKARVIDGLRPTTRAPSEKMTGKPSKKALAKRAERKEKEKEKPRVKQRHR
DTKNIGKRRKPSSAAPETKTEE
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaacgactttttccgaacttgaactcgatgaaagcctgctcaatgcacttgag
agcaaaggctttacacgcccgaccgccattcaggccgcggccattccgcctgcgcttgag
ggccgcgatgtgctcggttctgcgccaaccggcacggggaagacagcagcctacttgctg
cctgtgttgcagcatttgctcgattttccgcgtaaaaaatccggcccgccgcgtattttg
atcctgacgccgacccgtgaactggcgatgcaggttgcagaacacgcgcgtgaactggcg
gcgaacacccatctggatatcgccaccatcaccggcggcgttgcgtacatgaaccacgcc
gaagtgttcagcgaaaaccaggatattgttgttgcgacgaccggccgcctgctgcaatac
atcaaagaagagaacttcgactgccgcgcggttgaaacgttaatcctcgacgaagccgac
cgcatgctggacatgggctttgcgcaggatatcgaacacatcgcgggtgaaacgcgctgg
cgtaaccagaccatgctgttctcggcaacccttgaaggggatgccattaaagatttcgcc
gaacgtctgctggaagatccggtggaagtgtccgccacgccatcgacgcgtgagcgtaag
aagatccaccagtggtactaccgtgcggacaatcttgaacacaaggttgaattgcttaaa
cacctgctcaagcaggaagacgcgacccgtagcatcgtattcgtacgtaaacgcgagcgc
gtgcacgagctggctgaaatgctgcgcaacgctggcatcaataactgctatctcgaaggg
gaaatggcgcaggttaagcgtaccgaagggattaagcgcctgaccgatggtcgcgtgaac
gtgctggttgccaccgacgttgccgcacgcgggatcgacatcccggacgtgagccacgtg
atcaacttcgacatgccgcgcagtggtgatacctacctgcaccgtattggccgtaccggt
cgtgcgggccgcaaaggtattgccatttctctggtagaagcgcacgaccatctgctgctg
cagaaaattggccgctacgttgatgagccgctgaaagctcgcgtcattgacgggcttcgt
ccgaccacgcgtgcaccgagtgaaaaaatgacgggtaaaccgtccaagaaagcgctcgcg
aaacgtgcagaaagaaaagagaaagaaaaagagaagccgcgcgtgaagcagcgccaccgc
gataccaaaaacattggtaagcgccgtaagccaagctctgctgcgccagagacaaaaact
gaagagtaa
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