Enterobacter pseudoroggenkampii: QVH39_03400
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Entry
QVH39_03400 CDS
T09244
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
epu
Enterobacter pseudoroggenkampii
Brite
KEGG Orthology (KO) [BR:
epu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
epu03021
]
QVH39_03400 (rapA)
Transcription machinery [BR:
epu03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
QVH39_03400 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Cas3-like_C_2
Flavi_DEAD
AAA_34
Motif
Other DBs
NCBI-ProteinID:
WJW86686
LinkDB
All DBs
Position
complement(723545..726451)
Genome browser
AA seq
968 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVAIDTRMVTLLFPATGENRLYARNDSPVTRVMFNPGDT
VTSHDGWQLKIEDVKEENGLLAYIGTRLDTDEANVILREVLLDSKLVFSKPQDRLFAGQI
DRMDRFSLRYRARKFQSEQYRMPWSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVG
LGKTIEAGMILHQQLLSGAAERVLIVVPETLQHQWLVEMLRRFNLRFSLFDDERYAEAQH
DADNPFETEQLVICSLDFVRRSKQRLEHLCDAEWDLMVVDEAHHLVWSEDAPSREYMAIE
QLAERVPGVLLLTATPEQLGLESHFARLRLLDPNRFHDFAQFVEEQNNYRPVADAVAMLL
AGKRLSNDELNTLSDLIGEQDIEPLLQAANSESDNAESARKELIDMLMDRHGTSRVLFRN
TRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKTQEERARDMLYPEQIYQEFEGD
TGTWWNFDPRVEWLMGYLTAHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSI
VERDRAAAWFGEEDSGAQVLLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRI
GQAHDIQIHVPYLEKTAQSVLVRWFHEGLDAFEHTCPTGRTIYDQVHGDLIGYLAAPENT
DGFDDLIKSCREKHDALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTSLISFSM
NLFDIVGINQDDRGENLIVLTPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFITWE
HPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLTRFLPPTP
VRLLLDKNGTNLAGQVEFESFNRQLSAVNRHTGSKLVNAVQQDVHAILQLGETQIEKAAR
ALIDAARSEADEKLSAELSRLEALKAVNPNIRDDELAAIESNRQQVLESLNQASWRLDAL
RLIVVTHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccttttacacttggtcaacgctggatcagcgatacagaaagcgaacttggattagga
accgtcgtagcaatcgatacgcgtatggttaccctcctcttcccagccaccggtgaaaac
cgtctgtacgctcgcaatgactcccctgttacccgcgtgatgtttaatccgggtgacacc
gtgaccagccatgacggctggcagctcaagattgaagacgtaaaagaagagaatggactg
ctcgcctacatcggcactcgcctggacaccgacgaggccaatgtcatcctgcgtgaagtg
ctgctcgacagcaagctggtgttcagcaagccgcaggaccgcctgtttgccgggcaaatc
gaccgtatggatcgcttctccctgcgctatcgcgcgcgtaagttccagagtgaacagtac
cgcatgccgtggagcggcctgcgcggccagcgcaccagcctgatcccccaccagctgaac
atcgcccatgacgtgggccgtcgccacgcgccgcgcgtgctgctggcagatgaagtgggt
ctgggtaaaaccatcgaagcgggcatgatcctgcatcaacagctgctttccggggctgcc
gaacgcgtgctgattgtggtgccagaaaccctgcagcaccagtggctggtcgagatgctg
cgccgctttaacctgcgcttctccctgtttgacgatgagcgctatgccgaagcgcagcac
gatgcggacaacccgtttgaaaccgaacagctggtgatttgctccctggacttcgtgcgc
cgcagcaagcagcgtcttgagcacctgtgcgatgctgaatgggacctgatggtggtcgac
gaagcgcaccacctggtctggagcgaagatgcgccgagccgcgaatatatggctatcgag
cagcttgccgaacgcgtgcctggcgtcctgctgctgaccgcaacgccggagcagctgggt
ctggaaagccacttcgcccgtcttcgcctgctcgatccaaaccgtttccacgactttgcg
cagttcgtggaagaacagaataactaccgtccggtcgcggatgccgtcgccatgctgctg
gcgggcaagcgtctctctaatgacgaactcaacaccctgagcgatctgattggcgagcag
gatatcgagccgcttttgcaggccgcgaacagcgagagcgacaacgcggaatccgcgcgt
aaagagctgatcgacatgctgatggaccgccacggcaccagccgcgtgctgttccgaaat
acccgtaacggcgtcaaaggcttcccgaaacgcgagctgcacaccatcaagctgccgctg
ccgacgcagtatcagacggcgattaaagtctccggcattatgggcgcgcgcaaaacgcag
gaagagcgcgcccgcgacatgctttatccggaacaaatctaccaggaatttgaaggcgat
accggcacctggtggaacttcgatccgcgcgtggagtggctgatgggctacctgaccgcg
caccgctcccagaaagtgctggtgatctgcgccaaagcggccaccgcgctgcagctggag
caggtcctgcgcgagcgcgaaggtattcgtgccgccgtgttccacgaaggcatgtccatc
gtcgagcgcgaccgcgccgcggcgtggttcggggaagaggacagcggcgcgcaggttctg
ctgtgctcggaaatcggctctgaaggccgtaacttccagttcgccagcaacctggtgatg
ttcgatctgccgtttaacccggatctgctggagcagcgtatcggccgtctggaccgtatt
ggtcaggcgcatgatattcagatccacgtgccgtatctggaaaaaaccgcgcagtccgtg
ctggtacgctggttccacgaaggtctggacgcgtttgaacatacctgcccgacgggccgc
accatttacgatcaggtgcatggcgatctgatcggctacctggccgcgccggaaaacacc
gacggctttgacgatctgattaagtcctgccgcgagaagcacgatgcgctgaaagcgcag
ctggaacagggtcgcgatcgcctgctggagatccattccaacggcggtgaaaaagcgcag
gcgcttgctgagagtattgaagagcaagatgatgacaccagcctgatcagcttctccatg
aacctgttcgacattgtcggcatcaaccaggacgaccgtggcgagaacctgattgtcctg
accccgtccgatcacatgctggttccggatttcccgggcctgccggaagatggctgtacc
atcaccttcgagcgtgacgtggcgctgtcccgcgaagatgcccagtttatcacctgggaa
cacccgctgatccgcaacggtctggacctgatcctctccggcgataccggcagcagcacc
atctccctgttgaaaaacaaggcgctgcctgtcggcaccctgctggtagagctgatctac
gttgtggaagcgcaggcgccgaaacagctgcagctcacccgcttcctgccgccaacgccg
gtccgcctgctgctggacaaaaacggcacgaacctggccggacaggtcgagttcgaaagc
ttcaaccgacagctgagcgcggtgaaccgccataccggcagcaagctggttaacgcggtc
cagcaggacgtgcacgctattctgcaactgggcgaaacccagattgagaaagcggccaga
gcgctgattgacgctgcgcgtagtgaagccgatgagaaactgtctgcggagctgtcgcgt
ctggaagcgttaaaagccgtcaacccgaacattcgtgacgacgagctggcggcgattgaa
agtaaccgtcagcaggtgctggaaagcctgaatcaggcgagctggcgtctggatgccctg
cgtcttatcgttgtgacgcatcagtaa
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