Enterobacter pseudoroggenkampii: QVH39_04050
Help
Entry
QVH39_04050 CDS
T09244
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
epu
Enterobacter pseudoroggenkampii
Pathway
epu03030
DNA replication
epu03430
Mismatch repair
epu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
epu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QVH39_04050 (dnaE)
03430 Mismatch repair
QVH39_04050 (dnaE)
03440 Homologous recombination
QVH39_04050 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
epu03032
]
QVH39_04050 (dnaE)
03400 DNA repair and recombination proteins [BR:
epu03400
]
QVH39_04050 (dnaE)
Enzymes [BR:
epu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QVH39_04050 (dnaE)
DNA replication proteins [BR:
epu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QVH39_04050 (dnaE)
DNA repair and recombination proteins [BR:
epu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QVH39_04050 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
WJW86807
LinkDB
All DBs
Position
874786..878268
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFVHLRVHSDYSMIDGLAKTGPLVKKAASLGMPALAITDFTNLCGLVKFYGTAHGA
GMKPIVGADFHVQSDLIGDEMTQISVLAMNNTGYQNLTLLISKAYQRGYGALGPWIDRDW
LAELNEGLLLISGGRMGDVGKCLLRGNSALVDQCLSFYEEYFPDRYYLELIRTGRQDEEN
YLHAAVALAEERGLPVVATNDVRFLEPGDFDAHEIRVAIHDGFTLDDPKRPRNYSSQQYM
RSEEEMCELFSDIPEALENSVEIAKRCNVTVRLGEYFLPQFPTGDMTTEDFLVAKSKEGL
EERLEFLFPDEAVRKEKRPPYDERLDIELQVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVAD
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLAKAFEAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEAGQHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIINWALEMINARREKNGEPPLDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDVQWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM
AKQRGTFEEGARKNGVDGELAIKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKG
VGEGPIEAIIEARNNGGYFRELFDLCARTDTKKLNRRVLEKLIMSGAFDRLGPHRAALMN
SLGDALKAADQHAKAEAIGQADMFGVLAEEPEQIEQSYSNCQPWPEQVVLDGERETLGLY
LTGHPINQYIKEIERYVGGHRLKDMHPTERGKITTAAGLVIAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSD
RLLNDLRGLIGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaccacgtttcgtacacctgcgggtgcatagcgactactccatgatcgatggg
ctggcgaagaccgggccgctggtaaaaaaggcggcctcccttggcatgcccgcgctggcg
ataaccgattttaccaacctgtgtggcctggtgaagttctacggaacggcgcatggcgcg
gggatgaagcctatcgttggcgcagattttcatgtgcagagcgatctcatcggcgatgaa
atgacgcaaatctccgtgctggcgatgaacaacacgggctatcaaaacctcactctgctt
atctcaaaagcctaccagcgtggatacggtgcgctggggccgtggatcgaccgtgactgg
ctggctgagctgaacgaagggctgctgctgatctccggcggccgtatgggcgatgtcggc
aaatgcctgctgcgcggcaatagcgcgctggtggatcaatgcctctcgttctatgaagag
tatttcccggatcgttattatctggagctgatccgcaccggccgtcaggacgaagagaac
tatcttcatgccgctgtggcacttgcagaagagcgtgggttgcccgtggtggctaccaac
gatgtgcggttccttgagcccggggattttgacgcgcacgaaattcgcgtggcgatccac
gatggcttcacgctggacgatcctaaacgaccgcgcaactactcatcgcagcagtacatg
cgcagcgaagaggagatgtgtgagctcttctccgatatcccggaagcgctggaaaacagc
gtagagattgcaaagcgctgtaacgttaccgtccgccttggcgagtacttcctgccgcag
ttcccgacaggagacatgaccacggaagatttcctggtcgcaaaatcaaaagaaggtctg
gaagagcgtctggagtttctgttcccggatgaggccgttcgcaaagagaagcggccgccg
tacgatgaacgcctggatattgaactccaggtgatcaaccagatgggcttcccgggctac
ttcctgatcgtcatggagtttatccagtggtcgaaggataacggcgtaccggtcggaccg
ggccgaggctccggtgctgggtcgcttgtggcctatgcgcttaaaattaccgacctcgat
ccgctggaattcgacctgctgttcgaacgtttcctcaacccggaacgtgtttccatgccc
gactttgacgtcgacttctgcatggagaaacgtgaccaggtgatcgagcacgtcgccgat
atgtacggccgtgatgcggtatcgcagattattacgttcggtacgatggcggcgaaagcg
gttatccgtgacgtcggccgcgtgctgggccacccgtacgggtttgtcgatcgcatctct
aaactggtaccgcccgatccaggcatgacgctggcaaaagcctttgaggctgaaccacag
ctgccggaaatctacgaagcggacgaagaagtcaaagcgctgatcgacatggcgcgcaag
ctggaaggcgtcacgcgtaacgccggtaagcatgcggggggcgtggttatcgccccgacc
aaaattaccgactttgcgccgctctactgcgacgaagcgggccagcacccggttacccag
ttcgataagaacgacgtagaatacgccgggctggtgaagttcgacttccttggtctgcgt
acgttgaccatcattaactgggcgctggagatgatcaacgcccgccgcgagaagaacggc
gagccgccgttggatatcgcggccatcccgctggatgacaagaaaagtttcgacatgctg
cagcgctcggagaccaccgccgtcttccagctggaatcgcgcggcatgaaagatctgatt
aagcgcctgcagcccgactgcttcgaagatatgatcgcgctggtagccctgttccgtccg
ggcccgctacagtcagggatggtagataactttatcgaccgtaagcacgggcgcgaagag
atttcctacccggacgttcagtggcagcacgaaagcctgaagccggtgctggagcccacc
tacggcatcatcctgtaccaggaacaagttatgcagatcgcccaggtgctttccggctat
accctcggcggcgcggacatgctgcgtcgtgcgatgggtaagaaaaagccggaagagatg
gccaagcagcgaggtactttcgaagaaggcgcgagaaaaaacggcgttgatggtgaactg
gcgattaagatctttgacctggttgagaaattcgccgggtacggatttaacaaatcccac
tccgccgcctatgctttggtgtcgtaccaaacgctgtggctgaaagcgcactatcctgct
gaatttatggcggcggtaatgacggccgatatggataacaccgagaaggtggtgggcctg
gtggacgagtgctggcgcatggggcttaagatcctgccgccggacattaactcagggctc
taccacttccacgtcaatgacgacggggagatcgtttacgggatcggcgcgatcaaaggc
gtgggtgaaggtccgatcgaggcgatcatcgaagcgcgtaacaacggcgggtatttccgc
gagctgttcgatctttgcgcccgcaccgataccaaaaaactgaaccgtcgcgtgctggaa
aaactgatcatgtccggcgcgtttgaccggctggggccgcaccgcgccgcgctgatgaat
tccctcggcgatgcgctgaaagcggcggatcagcatgcaaaagcggaagccattggtcag
gcggatatgttcggggtgctggcggaagagccggagcagatcgagcaatcttactccaac
tgccagccgtggcctgaacaggtggtactggatggggagcgtgagacgttaggcttgtac
ctgacggggcacccgatcaaccagtacatcaaagaaattgagcgctatgtcggcggccac
aggcttaaagacatgcatccgacagaacgtggtaaaatcaccacggctgcggggctcgtg
attgctgcaagggttatggtcaccaagcgcggcaatcgtatcggcatctgtacgttggat
gaccgttccgggcgtctggaggtgatgttgttcaccgacgcgctggataaataccagcaa
ttgctggaaaaagaccgcatacttatcgtcagcggacaggtcagctttgatgacttcagt
ggggggcttaaaatgaccgcccgcgaagtgatggacattgacgaagcccgggaaaaatat
gctcgcgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttaaaccga
ctccgtcagtctctggaaccccaccgctcggggacaattccagtacatctctactatcag
agggcggatgcacgtgcgcggttgcgctttggtgcaacgtggcgtgtctctccgagcgat
cgtttactgaacgatctccgtggcctcattggttcggagcaggtggaactggagtttgac
taa
DBGET
integrated database retrieval system
