Enterobacter pseudoroggenkampii: QVH39_06935
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Entry
QVH39_06935 CDS
T09244
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
epu
Enterobacter pseudoroggenkampii
Brite
KEGG Orthology (KO) [BR:
epu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
epu03009
]
QVH39_06935 (rimO)
Enzymes [BR:
epu01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
QVH39_06935 (rimO)
Ribosome biogenesis [BR:
epu03009
]
Prokaryotic type
ribosomal protein modification factors
QVH39_06935 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
YajR_YAM
TRAM
Methyltransf_2
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
WJW87337
LinkDB
All DBs
Position
complement(1468115..1469449)
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AA seq
444 aa
AA seq
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MSHTKTPAYQPKVGFISLGCPKNLVDSERILTELRTEGYDVVPSYDNADMVIVNTCGFID
SAVQESLEAIGEALTENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLQHVHHYV
PKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLAE
AKRLADAGVKELLVISQDTSAYGVDVKHRSGFHNGEPVKTSMVGLCEQLSKLGIWTRLHY
VYPYPHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPD
LTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGATANELADQVPEEVKE
ERWNRFMQLQQQISAERLQEKVGREIMVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETS
VKPGDIIRVKVENADEYDLWGSRV
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtcccatactaaaacacctgcttatcaaccaaaagtaggatttatatctttaggctgc
ccgaaaaacctggtggattcagaacgcatcctgaccgaactgcgcaccgagggctatgac
gtggtgccaagctacgacaacgccgatatggtgatcgttaacacctgcgggtttatcgac
agcgcggttcaggagtcactggaagccatcggtgaagccctgacggaaaacggcaaagtg
atcgtgaccggctgtctgggcgcgaaagaagaccagatccgcgaagtgcacccgaaggtg
ctggagatcaccggcccgcacagctacgagcaggtgctgcaacatgttcatcactacgtg
ccaaaacccaagcacaacccgttcctcagcctcgtgccggaacagggcgtgaagctgacg
ccgcgtcactacgcgtacctgaaaatttccgaaggctgcaaccatcgctgcaccttctgc
atcatcccgtccatgcgtggcgatctggtgagccgtcccattggtgaagtgctggcggaa
gctaaacgtctggccgacgcgggcgtgaaggagctgctggtcatctcccaggacacctcg
gcctacggtgtagacgtcaaacatcgctccggtttccacaacggcgagccggtgaaaacc
agcatggtgggcctgtgcgagcagctgtccaaactcggtatctggacgcgtctgcactac
gtttacccgtacccgcacgttgacgacgtcatcccgctgatggctgaaggcaagattctg
ccgtacctggacatcccgctacagcacgccagcccgcgtatcctgaagctgatgaagcgc
cctggctccgttgaccgccagctggcgcgtatcaagcagtggcgcgagatctgcccggat
ctgaccctgcgctccaccttcatcgtcggcttcccgggtgaaaccgaagaagacttccag
atgctgctcgacttcctgaaagaagcgcgtctggaccgcgttggctgcttcaagtacagc
ccggtagaaggcgcaaccgccaacgagctggcggaccaggtgccggaagaggtgaaagaa
gagcgctggaaccgcttcatgcagctgcagcagcagatctctgctgagcgtctgcaggaa
aaagtgggccgcgagatcatggttatcatcgacgaagtggatgaagaaggcgcgattggc
cgcagcatggcggatgcccctgaaatcgacggtgcggtgtacctgaacggcgaaaccagc
gttaagccgggtgatattattcgcgtgaaggttgaaaacgcggatgagtatgacctgtgg
ggtagccgggtttaa
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