Enterobacter pseudoroggenkampii: QVH39_12995
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Entry
QVH39_12995 CDS
T09244
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
epu
Enterobacter pseudoroggenkampii
Brite
KEGG Orthology (KO) [BR:
epu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
epu03016
]
QVH39_12995
Enzymes [BR:
epu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
QVH39_12995
Transfer RNA biogenesis [BR:
epu03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
QVH39_12995
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
ODP
PilZ
Motif
Other DBs
NCBI-ProteinID:
WJW84188
LinkDB
All DBs
Position
2716101..2718035
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AA seq
644 aa
AA seq
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MFQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRV
MAVIHTEKDRESAEPEELIEPFLTRFVGKVQRKDDRLSIVPDHPLLKDAIPCRAARGVEH
DFKEGDWAVAEMRRHPLKGDRGFYAELTQFITFGADHFVPWWVTLARHNLEKEAPNGVAT
EMQDEGLTRRDLTALEFVTIDSASTEDMDDALYAEESADGKLHLTVAIADPTAWIVEGSK
LDDAAKIRAFTNYLPGFNIPMLPRELSDDLCSLRPNEVRPVLACRMTIAADGAIEDEIEF
FAATIESKAKLAYDNVSDWLENTGSWKPESDAIAAQIRLLHRICLNRSEWRQTHALVFKD
RPDYRFVLGEKGEVLDIVAEPRRIANRIVEEAMISANICAARVLRDKLGFGIYNVHTGFD
PANTEALAALLKNHDVHVDPEEVLTLPGFCKLRRELDAQPSGFLDSRIRRFQSFAEISTE
PGPHFGLGLEAYATWTSPIRKYGDMVNHRLLKAIIKGETVARPQEDTTLQMADRRRLNRM
AERDVGDWLYARFLQDKAGTDTRFAAEIIDISRGGMRVRLVDNGAVAFIPAPFLHAVRDE
MVCSQENGTVQIKGETVYKVTDVIDVTIAEVRMETRSIIARPVA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaggacaacccgctgctagcgcagcttaaacagcaactgcattcccagacgccg
cgtgcagaaggggtcgtaaaagccacggaaaagggctttggcttccttgaagttgacgcg
cagaaaagctacttcattccgccaccgcagatgaagaaagtgatgcatggcgatcgcgtc
atggccgtcattcataccgagaaggatcgcgagtccgctgaaccagaagaactgatcgaa
ccgttcctgacccgttttgtgggtaaggtgcagcgaaaagacgatcgtctttctatcgtg
ccggatcatcctctgctgaaagatgccattccctgccgcgccgcccgtggcgttgagcat
gattttaaagaaggtgactgggccgtagcagaaatgcgccgtcatcctctgaaaggcgat
cgcggtttttatgcggaactgacccagttcattacctttggcgccgatcatttcgtgcca
tggtgggtcacgctggcacgccacaatcttgaaaaagaagcgccgaacggcgtggcaacc
gagatgcaggacgaaggtctgacgcgtcgcgatctcaccgcgctggagtttgtcaccatc
gacagcgccagcaccgaagatatggacgatgcgctgtatgctgaagagagcgccgacggc
aaactgcatctgaccgtcgccattgccgatcccaccgcctggattgttgaaggcagcaag
ctggatgacgcggcgaaaatccgcgccttcaccaactacctgccgggcttcaacattccg
atgctgccgcgcgaattgtcagacgatctctgctcgctgcgtccaaatgaagtgcgcccg
gtccttgcctgccgcatgaccattgctgcggatggcgcgattgaagacgaaatcgagttc
tttgctgccactatcgaatcgaaagccaagctggcctacgataacgtgtccgactggctt
gaaaataccggtagctggaaacctgaatcagacgccattgccgcgcagatccgtctgctg
catcgcatctgtctcaaccgcagcgagtggcgtcaaacccatgcgctggtgttcaaagat
cgcccggattatcgctttgttctgggtgagaaaggcgaagtgctggatatcgtggccgaa
ccgcgacgcattgcgaaccgcattgttgaagaagcgatgatttccgccaacatctgcgcc
gcacgcgtgttgcgcgacaagctgggctttggcatttacaacgtccacaccgggtttgat
ccggcgaacaccgaagcgctggcggccctgctgaagaatcacgatgtgcatgttgatccg
gaagaagtgctgaccctgccgggcttctgcaagcttcgccgcgaactggacgcgcagccg
tcgggcttcctggacagccgcattcgtcgcttccagtcattcgcggaaatcagtaccgag
ccgggcccgcactttggtcttggcctcgaagcatacgccacctggacatcgccaatccgt
aagtatggcgatatggttaaccaccgtctgctgaaagcgattatcaaaggcgaaaccgtt
gctcgtcctcaggaggacaccacgctgcagatggccgatcgccgccgtctgaatcgcatg
gcggaacgtgacgttggagactggctgtacgcacgcttcctgcaggataaagccgggacg
gatacccgtttcgccgcagagatcatcgacatcagccgcggggggatgcgtgtccgcctg
gtcgataacggtgctgtcgcgtttattcctgcgccgttcctgcatgcggttcgtgacgaa
atggtctgtagtcaggaaaacggtaccgtgcaaattaaaggtgaaacagtttacaaggtc
accgacgtgattgacgttactatcgccgaagttcgcatggaaacccgcagtattatcgcg
cgccctgtcgcctga
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