Enterobacter pseudoroggenkampii: QVH39_13000
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Entry
QVH39_13000 CDS
T09244
Symbol
pdeR
Name
(GenBank) cyclic di-GMP phosphodiesterase
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
epu
Enterobacter pseudoroggenkampii
Pathway
epu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
epu00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
QVH39_13000 (pdeR)
Enzymes [BR:
epu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
QVH39_13000 (pdeR)
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_4
GGDEF_2
PAS_10
Motif
Other DBs
NCBI-ProteinID:
WJW84189
LinkDB
All DBs
Position
2718358..2720349
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AA seq
663 aa
AA seq
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MMDDLEPNLLFRYMGTHSPWWRLSADSNALHLSTSENADVTQVVALDDEQADLIRHLTVI
TSSISMSLSLYGEDVPVHLVGRKITRNEWAGTASAWNDTPSVARDLAQGLSFAEQVVSEA
NSVIVILDRHGNIQRFNRLSEEYTGLKEHEVIGQNVFKLFMSRSEAAASKRNITGFFRNG
SSYEVERWIKTRKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRVLANTD
TITGLPNRNAIHDLISDAIANRGDTQVGVVYLDLDNFKKVNDAYGHMFGDQLLQAVALAI
LSCLDEEQVLARLGGDEFIVMATNTSQGSLEAMASRILTRLRQPFRIGLIEIYTGCSLGI
ALAPQHGNDRESVIRNADTAMYTAKENGRGKFCVFSPEMNQRVFEYLWLDTNLRKALDND
QLLIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLEFISYAEESGLIVPLGRWVMLDVV
RQVAKWRDKGINLRVAVNVSARQLADQTIFSDLKQALKDLNFEYCPVDVELTESCLIENE
ELALSVIQQFSRLGAQIHLDDFGTGYSSLSQLARFPIDAIKLDQSFVRDIHKQSISQSLV
RAIVAVAQALNLQVIAEGVESAKEDAFLTKNGVNERQGFLFAKPMPAAAFERWLKRYQAR
NQR
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgatggacgatctggagccgaatttgctgtttcgctacatggggactcacagcccgtgg
tggcgcttgtcagctgacagcaacgctctgcacctttccaccagcgaaaatgccgatgtc
actcaggtcgtagcgctggacgatgaacaggccgatctcatccgtcatttaaccgttatt
acctccagcatttcaatgtcgctctccctctacggggaagatgttccggtccatcttgtg
ggccgtaaaattacccgtaacgagtgggccggaaccgcttctgcctggaacgataccccc
tccgtggcacgcgatctggctcaggggctctctttcgcggaacaggttgtctcagaggct
aactccgtcattgttattctcgatcggcacggcaatatccagcgttttaatcggcttagc
gaagagtacaccggcctgaaagaacatgaagtcattggccagaacgtctttaagctgttt
atgagccgcagcgaagcggcagcttcaaagcgcaatattaccggtttttttcgcaacggc
agctcctacgaagtcgaacgctggatcaaaacgcgtaaagggcaacggctgtttctgttc
agaaacaaattcgtacacagcggcagcggtaaaaatgaaattttccttatctgttccggt
accgatattaccgaggagcgccgcgctcaggagcgactgcgcgtgctggccaataccgat
accatcaccggcttgccaaaccgtaatgcgatccacgacctgatttctgacgccatcgcc
aaccgcggggacacgcaggtgggcgtggtgtatctcgatctggataattttaaaaaggtc
aacgacgcttacgggcatatgtttggcgatcagctgttacaggccgttgccctcgccatt
ttgagctgcctggatgaggaacaggtgctggcgcgacttggcggtgatgagtttatcgtc
atggccaccaatacctctcagggctctctggaggcgatggcatcgcgcattttaacccgt
ctgcgccagccgttccgcatcggtttgattgagatttataccggctgctccctgggcatc
gccctcgcccctcagcatggcaacgaccgggaaagcgtcattcgtaacgccgataccgcc
atgtacaccgccaaagagaacggccggggcaagttctgcgtcttctcgcccgagatgaac
cagcgcgtgtttgagtatctctggctggataccaacctgcgtaaggcgctggataacgat
cagctcctgattcactaccagccgaaaatcacctggcgcggggaagtcagaagccttgaa
gcgctggtccgctggcaatcaccagaacggggtttaatcccgccgctggagtttatctct
tatgccgaggagtcggggttgattgtgccgctgggccgctgggtgatgctcgatgtggtt
cgccaggtggcgaaatggcgtgataagggcataaacctgcgcgtggcggtgaacgtctct
gcacgccagctggccgaccagactattttcagtgacttaaagcaggcgctgaaggatctg
aattttgaatactgccctgtcgacgtcgaattaaccgaaagctgtcttatcgagaacgaa
gagctggcgctgtccgtgatccagcagttcagccgactcggggcgcaaattcatctggat
gattttggcaccggctactcttccctttctcaactggcccgcttccctatcgatgccatt
aaactcgatcaatcgtttgtcagggatattcataagcagtccatctcccagtctctggtg
cgcgctatcgtcgcggtggcgcaggcgttaaatctgcaggtgattgccgaaggtgtggaa
agcgcaaaagaagacgcctttctcaccaagaacggcgtcaacgaacggcagggttttctg
tttgctaagccgatgcccgctgccgcattcgagcgatggctaaaacgatatcaagcgcga
aatcaacgttaa
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