Enterobacter pseudoroggenkampii: QVH39_13080
Help
Entry
QVH39_13080 CDS
T09244
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
epu
Enterobacter pseudoroggenkampii
Brite
KEGG Orthology (KO) [BR:
epu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
epu03032
]
QVH39_13080 (topA)
03400 DNA repair and recombination proteins [BR:
epu03400
]
QVH39_13080 (topA)
Enzymes [BR:
epu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
QVH39_13080 (topA)
DNA replication proteins [BR:
epu03032
]
Prokaryotic type
DNA Topoisomerases
QVH39_13080 (topA)
DNA repair and recombination proteins [BR:
epu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
QVH39_13080 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
WJW84204
LinkDB
All DBs
Position
complement(2732336..2734933)
Genome browser
AA seq
865 aa
AA seq
DB search
MGKALVIVESPAKAKTINKYLGNDYVVKSSVGHIRDLPTSGSASKKSADSTSTKGAKKPK
KDERSALVNRMGVNPWHNWDAQYEVLPGKEKVVNELKQLAEKADHIYLATDLDREGEAIA
WHLREVIGGDDKRYSRVVFNEITKNAIRQAFEKPGELNIDRVNAQQARRFMDRVVGYMVS
PLLWKKIARGLSAGRVQSVAVRLVVEREREIKAFVPEEFWEVDANVTTPGGDALPLQVSH
QNDKPFRPENRDQTMAAVALLEKARYQVLEREDKPTSSKPGAPFITSTLQQAASTRLGYG
VKKTMMMAQRLYEAGYITYMRTDSTNLSQDAVNMVRGYISDNFGKKYLPESANQFASKEN
SQEAHEAIRPSDVSVLAESLKDMEADAQKLYQLIWRQFVACQMTPAQYDSTTLTVGAGDF
RLKARGRILRFDGWTKVMPALRKGDEDRTLPAVNKGDELSLVDLVPAQHFTKPPARFSEA
SLVKELEKRGIGRPSTYASIISTIQDRGYVRAENRRFYAEKMGEIVTDRLEANFRELMNY
DFTAQMEDSLDQVASHQAEWKKVLDSFFSDFTDQLEKAEKDPEEGGMLPNQMVLTSIDCP
TCGRKMGIRTATTGVFLGCSGYALSPKERCKTTINLVPENEVLNVLEGDDAETNALRAKR
RCKKCGTAMDSYLIDPKRKLHVCGNNPTCDGYEIEEGEFRIKGYDGPIVECEKCGSEMHL
KMGRFGKYMACTNDECKNTRKILRNGEVAPPKEDPVPLPELPCEKSDAYFVLRDGAAGVF
LAANTFPKSRETRAPLVEELHRFRDRLPEKLRYLADAPQQDPEGNKTVVRFSRKTKQQYV
AAEKEGKATGWSAFFVDGKWVEGKK
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagctctcgtcatcgttgagtccccggcaaaagccaaaacgatcaataagtat
ctgggtaatgactacgtggttaagtccagcgtgggtcatatccgcgatttgccgaccagt
ggctcagccagcaaaaagagcgcagactctacctccaccaaaggggctaaaaagcctaaa
aaggatgaacgtagcgcgcttgtcaaccgcatgggtgttaacccatggcataactgggac
gcacaatatgaagtgctgcccgggaaagaaaaagtcgttaacgagctcaagcagctggct
gaaaaagcagaccacatctatctcgcaaccgaccttgaccgcgaaggggaagccattgcg
tggcacctgcgggaagtgattggtggtgatgacaaacgctacagtcgtgtagtgtttaac
gaaattacgaagaatgcgattcgtcaggcgtttgagaagccgggcgaactgaatattgac
cgtgtaaacgcacagcaggcacgtcgctttatggaccgcgttgtgggctacatggtttct
ccactgctgtggaagaagattgcccgtggcctgtcagcagggcgtgtgcaatccgtcgcc
gtgcgtctggtcgttgagcgtgagcgcgagattaaagccttcgtgccggaagagttctgg
gaagttgacgccaatgtgaccacgccgggcggtgacgctctgccgttgcaggtcagccat
cagaacgataagcctttccgtccagaaaaccgcgaccagaccatggccgccgtagcgctg
ctggaaaaagcacgctaccaggtgctggaacgtgaagacaaaccgaccagcagcaagccg
ggtgcgccgtttattacctcaacgctgcaacaggctgcaagcacgcgtctgggttacggc
gtgaagaagaccatgatgatggctcagcgcctgtatgaagcgggctacatcacctacatg
cgtaccgactcaaccaacctgagccaggacgcggtcaacatggtgcgcggttacatcagc
gacaatttcggtaagaaatacctgccggaaagcgctaaccagttcgccagcaaagagaac
tctcaggaagcacacgaagcgattcgtccttctgatgtctctgtgttagcggaatcactg
aaagacatggaagccgacgcgcagaagctgtatcagctgatctggcgccagttcgtggcg
tgccagatgaccccggcacagtatgactcaaccacgctgaccgttggtgcgggtgatttc
cgtctcaaagcgcgtggccgtatcctgcgtttcgacggctggacgaaagtgatgcctgca
ctgcgtaaaggtgatgaagaccgaacgctgccggcagtgaacaaaggggatgagctctcg
ctggttgatctcgtgccagcccagcacttcaccaagccgcctgcgcgcttcagtgaagca
tctctggtaaaagagctggaaaaacgcggtattggccgtccgtcgacctacgcgtcgatc
atctctacgattcaggaccgtggttacgtacgcgctgaaaaccgtcgtttctatgcggaa
aaaatgggtgagatcgtcaccgaccgtctggaagctaacttccgcgagttgatgaactac
gatttcaccgcgcaaatggaagacagcctcgaccaggttgccagccatcaggcggaatgg
aaaaaggtcctcgacagcttcttcagcgactttaccgaccagcttgagaaagcggagaag
gatcctgaagagggcggcatgctgcctaaccagatggttctgaccagcatcgactgccca
acctgtggtcgcaagatggggatccgtactgccacgacgggcgtgttccttggctgctcc
ggctacgcgctgtcgccaaaagagcgctgcaaaaccaccatcaacctggtgcctgagaac
gaagttctcaacgtgctggaaggtgacgatgcggaaactaacgctctgcgtgccaaacgc
cgctgcaaaaaatgcggcacggcaatggacagctacctgatcgatccaaaacgtaagctg
cacgtctgcggtaataacccaacgtgtgacgggtatgagatcgaagagggcgagttccgc
attaaaggctatgacggcccgattgtagagtgcgagaagtgtggctctgaaatgcacctg
aaaatggggcgtttcggtaagtacatggcctgtaccaacgacgagtgtaaaaacacgcgc
aaaattctgcgtaatggtgaagtggctccgccgaaggaagatccggttccgctgccagaa
ctgccgtgcgagaaatctgacgcgtactttgtgctgcgtgacggcgctgcgggtgtcttc
ctggccgccaacaccttcccgaaatcgcgtgaaacgcgcgcgccgctggtggaagagctg
catcgcttccgcgatcgtctgcctgagaaactgcgttatctggccgatgcgccacagcag
gatccggaaggcaacaaaaccgtggtacggtttagccgtaaaaccaagcagcagtatgtt
gcggccgagaaagagggtaaagcgaccggatggtcagctttctttgtcgatggcaaatgg
gttgaaggcaagaaataa
DBGET
integrated database retrieval system
