Enterobacter pseudoroggenkampii: QVH39_17535
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Entry
QVH39_17535 CDS
T09244
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
epu
Enterobacter pseudoroggenkampii
Brite
KEGG Orthology (KO) [BR:
epu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
epu03009
]
QVH39_17535 (srmB)
Enzymes [BR:
epu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QVH39_17535 (srmB)
Ribosome biogenesis [BR:
epu03009
]
Prokaryotic type
rRNA helicases
QVH39_17535 (srmB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
DUF561
AAA_30
AAA_11
LuxC
CMS1
Motif
Other DBs
NCBI-ProteinID:
WJW85033
LinkDB
All DBs
Position
3674615..3675943
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AA seq
442 aa
AA seq
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MTVTTFSELELDESLLNALESKGFTRPTAIQAAAIPPALEGRDVLGSAPTGTGKTAAYLL
PVLQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAANTHLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRW
RNQTMLFSATLEGEAIKDFAERLLEDPVEVSATPSTRERKKIHQWYYRADNLEHKVELLK
HLLKQEDALRTIVFVRKRERVHELAEMLRNAGINNCYLEGEMAQIKRTEGIKRLTDGRVN
VLVATDVAARGIDIPDVSHVINFDMPRSGDTYLHRIGRTGRAGRKGIAISLVEAHDYLLL
QKIGRYVDEPLKARVIDGLRPTTRAPSEKMTGKPSKKALAKRAERKEKEKEKPRVKQRHR
DTKNIGKRRKPSSAAPETKTEE
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaacgactttttccgaacttgaactcgatgaaagcctgctcaatgcacttgag
agcaaaggctttacacgcccgaccgccattcaggcagcggccattccgcctgcgcttgag
ggccgcgatgtactcggttctgcgccaaccggcacggggaagacagcagcctatttgctg
cctgtgttgcagcatctgctcgactttccacgtaaaaaatctggcccgccgcgtatttta
atcctgacgcctacgcgcgaactggccatgcaggttgccgatcacgcgcgtgaacttgcg
gcaaatacccatctggatatcgccaccattaccggcggcgttgcgtacatgaaccacgcc
gaagtgttcagcgaaaaccaggacatcgtcgttgcgacgacgggccgcctgctgcagtac
attaaagaagagaacttcgactgccgcgcggttgaaacgctgatcctcgacgaagccgac
cgcatgctggacatgggcttcgcacaggatatcgagcacattgccggggaaacacgctgg
cgtaaccagacgatgctgttctctgccaccctcgaaggggaagcaatcaaagacttcgca
gagcgtctgctggaagatccggtggaagtgtcggctacgccgtccacccgtgagcgtaag
aagatccaccagtggtactaccgcgcggacaaccttgaacacaaggtcgaattgctgaaa
cacctgctgaagcaggaagatgcgctgcgcacaatcgtatttgtgcgtaagcgcgagcgc
gtgcacgagctggctgaaatgctgcgtaacgccgggatcaacaactgctatcttgaaggc
gagatggcgcagatcaagcgtaccgaaggcatcaagcgcctgaccgatggccgcgttaac
gtgctggttgccacagacgttgccgctcgcgggatcgacatcccggacgtcagccacgtc
attaacttcgatatgccgcgcagcggcgatacctatctgcaccgtattggccgtaccggc
cgcgcgggccgcaaagggattgcgatttcactggttgaagcgcatgactacctgctgctg
cagaaaattggccgctatgttgacgagccgctgaaagcgcgcgttattgacggcttgcgc
ccaaccacacgtgcgccgagtgaaaaaatgacgggtaaaccgtccaagaaagcgctcgcg
aaacgtgctgagagaaaagagaaagaaaaagagaaaccgcgcgtgaagcagcgccaccgc
gataccaaaaatattggtaagcgccgtaagccaagctctgccgcaccagagacgaaaact
gaagagtaa
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