Enterobacter pseudoroggenkampii: QVH39_18760
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Entry
QVH39_18760 CDS
T09244
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
epu
Enterobacter pseudoroggenkampii
Pathway
epu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
epu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
QVH39_18760 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
epu03400
]
QVH39_18760 (recD)
Enzymes [BR:
epu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
QVH39_18760 (recD)
DNA repair and recombination proteins [BR:
epu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QVH39_18760 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
Helicase_RecD
Viral_helicase1
SH3_13
AAA_11
UvrD-helicase
AAA_22
SLFN-g3_helicase
nSTAND3
PhoH
AAA_28
AAA_16
MukB
CbiA
T2SSE
NPHP3_N
ATPase
UvrD_C
SRP54
DO-GTPase1
DEAD
NTPase_1
AAA
Motif
Other DBs
NCBI-ProteinID:
WJW85253
LinkDB
All DBs
Position
complement(3917999..3919819)
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AA seq
606 aa
AA seq
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MTMQALLLDAVEQRLLRHLDVQFAMMVAGEEPAVMLAAAILSKDAGEGHVCLPLSRLAVD
EKMPPALQACFALLGDAVDWQEILLDSPAVSGADTGTPMILVGERLYLNRLWRNELTVAR
FFSETNAPLPCDEVKLRQTLDALFTSDEATDWQKVAAAVALTRRISVISGGPGTGKTTTV
AKLLAALIQLSGEQKCRIRLAAPTGKAAARLTESLGGALQKLPLTGEQLALFPNEASTLH
RLLGAQPGSQRLRYHAGNPLHLDVLVVDEASMIDLTMMSRLIDALPPHARVIFLGDRDQL
ASVEAGAVLGDICTYASLGYTAERAQELARLTGCSLTSENHSLAGALRDSLCLLQKSYRF
GSDSGIGQLAAAVNRGDRRATTAVFDGTFKDIEKKSLQSAEEYQAMLDDALQGYQRFLTD
VQQQSTPEQVIASFGEYQLLCALREGPFGVRGLNDRLEQLLAQKRKINRTPHSRWYEGRP
VMISRNDSALGLFNGDIGIALDCGQGLRVWFQMPDGSVKSFQPSRLPEHETAWAMTVHKS
QGSEFNHAALILPTQLSPVITRELIYTAITRARQRLSLYTDERVLVQAIATRTERRSGLG
AIFESL
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgcaggcgctactgctggacgcggttgaacaacgattactgcgccacctggac
gtgcagtttgccatgatggtggcaggcgaggagcctgccgtcatgcttgccgccgccatt
ctgagcaaagacgcgggggaggggcacgtatgtctgccgctgtcgcgtctggcggtggat
gagaaaatgcctccggctttacaggcttgtttcgcgctgctgggtgacgccgtggactgg
caggagatattactcgactcgcctgccgtgagcggagccgataccgggacgccaatgatt
ctggtcggcgagcgtttgtatcttaaccggctgtggcgtaacgaactgacggtggcgcgc
ttcttcagcgagaccaacgcgccgcttccctgcgatgaagtaaagctccggcaaacgctg
gatgcgctgttcacctctgatgaggcgacagactggcagaaagtggcggcagccgtggcc
ttaacgcgacggatctcagtgatttctggcggcccgggtaccgggaaaacgaccaccgtg
gcaaaactgcttgccgcgttgattcagttatcgggtgagcaaaagtgccgtattcgcctg
gcggcccccaccggtaaagcggcggcacgtctgacggagtcgttaggcggcgcgctgcaa
aagctgccgctaaccggggagcagcttgcgcttttccccaatgaggccagcacgctgcac
cgtttgcttggcgcacagccgggtagccagcgtctgcgctatcatgccggtaatccgctg
caccttgacgtgctggtggtggatgaagcctcaatgattgacctgacgatgatgtcgcgt
ttgatcgatgcgctcccgccgcacgcgcgcgtcattttcctcggcgatcgtgaccagctt
gcctccgttgaggcgggggcggtactgggtgatatctgtacctatgccagcctgggatat
accgctgaacgcgctcaggagttagcccgtctcaccggatgctcgctcacctctgaaaat
cattcgctagcaggggcgctgcgcgacagcctgtgtctgctgcaaaaaagctaccgtttc
ggcagcgactccggcatcggccagcttgcggcagcggtgaaccggggcgaccggcgcgcc
accacggcggtatttgacggaacctttaaggatattgagaaaaaatcgctgcaaagcgcg
gaagagtatcaggcgatgcttgacgacgccctgcaggggtaccagcgctttctgacggac
gtacaacagcaaagtacgccggagcaggtcattgcctcgtttggcgaatatcagttgctc
tgtgcgctgagggaaggcccctttggtgtccggggtcttaacgacaggctggaacagttg
ctggcgcaaaaacgcaaaattaaccgtaccccgcactcgcgctggtatgaagggcgaccg
gtgatgatctcccgcaacgacagcgcgctgggattgtttaacggggatatcgggattgcg
ctcgactgcggtcagggtctgcgcgtctggttccagatgccggacggcagcgtgaagtct
ttccagcccagccgtttgcccgagcatgaaaccgcctgggcgatgacggtgcataaatcc
cagggctccgagtttaaccacgcggcgctgatcctgcccacgcagctttcccccgtcatt
acccgagagctgatctataccgccataacgcgcgcgcgtcagcgcctgtcgctgtatacc
gatgaacgcgtgctggtgcaggcgattgccacccgtacggaacgtcgaagcgggctgggc
gcgatatttgaatccctctga
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