Enterobacter pseudoroggenkampii: QVH39_18765
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Entry
QVH39_18765 CDS
T09244
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
epu
Enterobacter pseudoroggenkampii
Pathway
epu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
epu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
QVH39_18765 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
epu03400
]
QVH39_18765 (recB)
Enzymes [BR:
epu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
QVH39_18765 (recB)
DNA repair and recombination proteins [BR:
epu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QVH39_18765 (recB)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
AAA_25
Motif
Other DBs
NCBI-ProteinID:
WJW85254
LinkDB
All DBs
Position
complement(3919816..3923358)
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AA seq
1180 aa
AA seq
DB search
MTDTAESLDPLRLPLQGERLIEASAGTGKTFTIAALYLRLLLGLGGNAAFPRPLSVEELL
VVTFTEAATAELRGRIRTNIHELRIACLRQSTNNPLYASLLEEIADKQQAAQWLLLAERQ
MDEASVFTIHGFCQRMLSLNAFESGMLFEQQLIEDESVLRYQACADFWRRHCYPLPRDIA
EAVHALWKGPEALLRAIDRYLQGEAPVIKSPPPADETLASRHEKIIAQIADIKQKWLESV
GEIDAIIENSGIDRRKFNRGNQGKWIDKIGAWAQEETRGYQLPDALEKFSQRFLVERTKA
DGIVPEHPLFVAIESLLAEPLTLNDLMITRAMTEIREAVAREKRRRGELGFDDMLSRLDA
ALCSENGEALAAAIRTRFPVAMIDEFQDTDPQQYRIFRRIWRQQPDTALLLIGDPKQAIY
AFRGADIFTYMKARSEVDAHYTLDTNWRSSPGMVESVNGLFSRMDTAFMFREIPFQPVKF
AEKNASLRFEFNGETQPAMNFWLLDGEGCGVADYQNAMAQHCAAQIRDWLSAGARGDALL
WKGDNPTPVKASDITVLVRSRQEAALIRDALTLLNIPSVYLSNRDSVFETLEAQEMLWLL
QAVLAPERESTLRSALASAMLGLNARDIDALNNDEAAWDAVVEEFVRYREKWQKRGVMAM
VRELMAQRHIAENMLATAGGERRLTDILHISELLQEACTQLESEHALVRWLAQQIADPNS
NSSSQQMRLESDKHLVQIVTIHKSKGLEYPLVWLPFIANYRVQDQAFYHDRESFEAVLDL
SNAESSVELAEAERLAEDLRLLYVALTRSVWHCSLGVAPLFRRRGEKSGESDFHLSALGR
LIQQGEPKDAAGLRQCIESLCSEHVALHIPSLPDNSRWQMPELRDSALHARQVVRTIADD
WRVTSYSGLQQHGQSIAQDLMPKLDVDAAGAGSVPVEPVLTPHQFPRGASPGTFLHSLFE
ELDFTQPVSEEWVLKMLQSGGYDAHWQPVLTDWIRAVLHAPLTAQGISLSQLTTKDKQVE
MEFYLPIASPLRAEALDALTREYDPLSAGCPPLNFRQVQGMLKGFIDLVFRHEGRYYLLD
YKSNWLGESSEAYTQQAMASAMQLHRYDLQYQLYTLALHRYLRHRIADYRYDAHFGGVIY
LFLRGVDADDPRSGVFSTRPAAELIEKMDNLFAAGTEEVA
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgaccgataccgctgagtcccttgatcccttacgtttacctctgcagggtgaacgattg
attgaagcctcagcgggaacgggaaaaaccttcaccatcgccgccctttatctgcgtctg
ctgctggggcttggcggcaacgccgcttttccacgccctttgagcgtggaagagctgctg
gtggtgaccttcaccgaggctgctaccgctgagctgcggggccgtattcgtaccaatatc
cacgagctgcgcatcgcctgtctgcgtcagagcacgaataaccctctctacgcgagtctt
ctggaagagattgccgataagcaacaggcagcccagtggctgctcctcgccgaacggcag
atggatgaagcgtccgtcttcaccattcacggtttttgccagcgcatgctgagcctgaat
gcgtttgaatccggtatgctgtttgagcagcagcttattgaagatgaatccgtgcttcgc
tatcaggcctgcgcggatttctggcgtcgccattgctacccgttaccgcgcgatatcgcc
gaagccgtacacgcgttgtggaagggcccggaggcgctgctgcgcgctatcgatcgttat
ctgcagggggaagcgccagtcatcaaatccccgccgccggcagatgaaacgctggcctca
cggcatgaaaagatcatcgcgcagattgccgacatcaagcaaaaatggcttgagtccgtt
ggcgagattgacgcaatcatcgaaaattccgggattgaccgacgcaagtttaaccgtggc
aatcaggggaaatggatcgacaagatcggcgcctgggcgcaggaagagacgcgaggctac
cagctcccggacgcgctggagaaattctcccaacgtttcctggttgagcggaccaaagcc
gacggcattgtccctgagcatcccctgtttgtggcgattgaatccctgctggcggagccc
ttaacgctcaacgatctgatgattacccgcgccatgacggaaattcgcgaagccgtcgcg
cgtgagaaacgccgccggggtgaactgggtttcgacgatatgctgagccgcctcgatgcg
gcgctgtgcagtgaaaacggtgaagcgcttgccgccgcgatccgcacccgtttcccggtg
gcgatgatcgacgaatttcaggataccgacccgcagcagtaccgcattttccgccgtatc
tggcgccagcagcccgacaccgcactgctgttaatcggcgatccgaaacaggctatctac
gccttccgcggtgcggatattttcacctacatgaaagcccgcagcgaggttgacgcgcac
tacacgctcgataccaactggcgctcctctcccggcatggtggaaagcgtcaacgggctc
ttcagccgcatggatacggcgtttatgttccgggagatcccgtttcagccggtaaagttt
gccgagaaaaatgcctcgttgcgcttcgagttcaacggcgagacgcagcctgccatgaac
ttctggctgctggatggggaaggctgcggcgttgccgactatcaaaatgccatggctcag
cactgtgccgcgcaaatccgtgactggctcagtgcgggtgcgcgcggtgacgcgctgctg
tggaagggggataaccccaccccggtaaaggcatcggatattacggtactggtgcgtagc
cgtcaggaggccgcgctcatccgcgacgccctgacgttactgaatatcccctccgtctac
ctctcaaaccgcgacagcgtctttgaaacgctggaagcgcaggagatgctatggctgctg
caggccgtgctggccccggagcgggaaagcacgctgcgcagcgcactggcgagcgcgatg
ctcgggctgaatgcccgggatattgatgcgctcaacaatgacgaagccgcatgggatgcc
gtggtcgaagagtttgttcgctaccgcgaaaaatggcagaagcgcggggtaatggcaatg
gtgcgcgagctcatggcgcagcgccacattgcggagaatatgctggcgacagcaggcggc
gagcgccgtttgaccgatattttacatatcagcgaactgttgcaggaagcgtgtacgcag
ctggagagcgagcacgctctggtgcgctggctggcgcagcagattgccgatccgaacagc
aattcgtccagccagcagatgcgcctcgagagtgataaacatctggtgcagatcgtcacc
attcacaaatcaaaaggcctggaatatccgctggtctggctgccgtttatcgccaattac
cgcgtgcaggatcaggctttttaccacgatcgcgaatcgtttgaggcggtgctcgatctc
agcaacgcggagtccagcgttgagctggcagaggctgaacgtctggcggaagatttgcgc
ctgctctacgtggcgctgacccgttcggtctggcactgcagcctgggcgttgcgcctctg
ttccggcgtcggggcgaaaagagcggggagagcgattttcatctgagcgcgctggggcgg
cttattcagcagggtgaacccaaagacgcggctggcctgcgccagtgcatcgaatccctt
tgctctgagcatgttgccctgcatattccttcgctgcccgacaacagccgctggcagatg
ccggagctgcgtgattctgcgctccatgcccgccaggttgtgcgtacgatagccgacgac
tggcgcgtcaccagctactccggtttacaacagcacgggcagagtattgcgcaggatctg
atgccaaaactggacgtggatgccgcgggggccggtagcgtacccgttgagccggtgctc
acgccgcaccagttcccgcgcggcgcttctccgggcacgtttttgcacagcctgtttgaa
gagctggattttacccagccggtttccgaagagtgggtgctgaagatgttacagagcggt
ggttacgacgcgcattggcagccggttctcaccgactggatccgcgcggttctgcatgct
ccgctcaccgcgcaggggatttcgcttagccagttgactaccaaagataagcaggtggag
atggagttttatctccccatcgccagcccgctcagggcagaggcgcttgatgcgttgacc
cgcgagtacgatccgttatccgccgggtgcccgccgctgaacttccgccaggtgcagggg
atgctcaaaggctttatcgacctggttttccgccacgaagggcgctactacctgctggat
tacaaatcgaactggctgggtgaaagcagcgaagcctatacccaacaggcgatggcgtcg
gctatgcaactacatcgctacgatctgcagtaccagctttataccctggcgctgcaccgt
tacctgcgccatcgtattgccgattaccgttacgacgcgcattttggcggcgtgatttac
ctgttcctgcgcggcgtggatgccgacgacccgcgttccggcgtctttagcacgcgtccg
gctgcggaactgattgaaaaaatggataacctgtttgctgcaggcacggaggaggtggca
tga
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