Enterobacter pseudoroggenkampii: QVH39_20450
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Entry
QVH39_20450 CDS
T09244
Name
(GenBank) DEAD/DEAH family ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
epu
Enterobacter pseudoroggenkampii
Pathway
epu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
epu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QVH39_20450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
epu03019
]
QVH39_20450
03009 Ribosome biogenesis [BR:
epu03009
]
QVH39_20450
Enzymes [BR:
epu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QVH39_20450
Messenger RNA biogenesis [BR:
epu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QVH39_20450
Ribosome biogenesis [BR:
epu03009
]
Prokaryotic type
rRNA helicases
QVH39_20450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
DeaD_C
ResIII
CMS1
DRTGG
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WJW85566
LinkDB
All DBs
Position
complement(4249292..4251187)
Genome browser
AA seq
631 aa
AA seq
DB search
MAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLSGRDVLGMAQTGSGKTAAF
SLPLLNNIDPDLRAPQILVLAPTRELAVQVAEAMTEFSKHMRGVNVVALYGGQRYDVQLR
ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPDG
HQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWSVYGMRKNEALVRFL
EAEDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILI
ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI
ERTMKLTIPEADLPNAELLGKRRLEKFAAKVQQQLESSDLDQYRALLSQIQPVAEGEELD
METLAAALLKMAQGERSLIVPPDAPMRPKREFRDRDDRFERRGDRNDRGPRGDRPERGGE
DRPRRERRDAGDMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIEL
PKGMPGEVLQHFTRTRILNKPMNMQLLGDAQPRPDRGGERRGGGRGFGGERREGGRSEGR
GGEGRRFSGERRESRGPRREEGTSRRRFGDA
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggctgaattcgaaaccacttttgcagatctgggcctgaaggctcctatccttgaagcc
cttaacgatctgggttacgaaaaaccatctccgatccaggctgagtgtatcccacacctg
ctttctggtcgtgacgtgctgggcatggcccagactggtagcggtaaaactgcagcattc
tcgctgccgctgctgaacaacattgatccggacctgcgtgctccgcagatcctcgtcctg
gctccaacccgtgaactggctgttcaggttgcagaagccatgacggaattctctaaacat
atgcgcggcgtaaacgtggtagccctgtacggtggccagcgttatgacgtgcagttacgc
gccctgcgtcagggcccacagattgttgtcggtacgccgggccgtctgctggatcacctg
aagcgcggtaccctggacctctctaaactgagcggcctggtactggatgaagcagatgaa
atgctgcgtatgggcttcatcgaagacgttgaaaccatcatggcgcagatcccggacggt
catcagaccgcgctgttctctgcaaccatgccggaagctatccgtcgcattacccgccgc
ttcatgaaagagccgcaggaagtgcgtattcagtccagcgtaaccactcgcccggacatc
agccagagctactggtctgtgtacggcatgcgtaaaaacgaagcgctggtacgtttcctg
gaagcggaagattttgatgcggcgattatcttcgttcgtaccaaaaacgcgaccctggaa
gtggctgaagccctggagcgtagcggctacaacagcgcagctctgaacggcgatatgaac
caggccctgcgtgagcagactctggagcgtctgaaagacggtcgtctggatatcctgatt
gccaccgacgtggcagcacgtggtctggacgttgagcgtatcagcctggttgttaactac
gacatcccgatggattccgagtcttacgttcaccgtatcggccgtaccggtcgtgcgggt
cgtgctggccgtgcgctgctgttcgttgagaaccgcgagcgtcgtctgctgcgtaacatc
gaacgtaccatgaagctgaccattccagaagcggacctgccaaacgcagagctgctgggc
aaacgccgtctggaaaaattcgccgccaaagtacagcagcagctggaaagcagcgatctg
gatcagtaccgcgcgctgctgtcgcagattcagcctgttgctgaaggcgaagagctggac
atggaaaccctggctgcagcactgctgaaaatggctcagggcgaacgtagcctgatcgtg
ccgccagatgcgccgatgcgtcctaagcgtgaattccgtgaccgtgacgatcgcttcgaa
cgtcgtggcgaccgtaacgatcgtggcccacgtggtgaccgtccagagcgtggtggtgaa
gaccgtccacgtcgtgaacgtcgcgacgcaggtgacatggaactgtaccgcattgaagtg
ggtcgtgatgatggcgttgaagttcgtcacatcgttggcgcgatcgctaacgaaggcgac
atcagcagccgttacatcggtaacatcaagctgttcgcatcccactctaccatcgagctg
ccaaaaggcatgccgggcgaagtgctgcagcactttacgcgtacccgcatcctgaacaag
ccgatgaacatgcagctgctgggcgatgcacagccacgtcctgaccgtggcggcgaacgc
cgtggtggtggtcgcggtttcggcggcgagcgtcgtgaaggcggtcgcagcgaaggtcgc
ggtggtgaaggtcgtcgtttctccggcgagcgccgcgaaagccgtggcccgcgtcgtgaa
gaaggcaccagccgtcgtcgtttcggtgacgcgtaa
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