Enterobacter pseudoroggenkampii: QVH39_22420
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Entry
QVH39_22420 CDS
T09244
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
epu
Enterobacter pseudoroggenkampii
Pathway
epu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
epu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QVH39_22420 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
epu03019
]
QVH39_22420 (rhlB)
Enzymes [BR:
epu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QVH39_22420 (rhlB)
Messenger RNA biogenesis [BR:
epu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QVH39_22420 (rhlB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CCDC138_C
ERCC3_RAD25_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WJW85925
LinkDB
All DBs
Position
4648856..4650124
Genome browser
AA seq
422 aa
AA seq
DB search
MSKTHLTEQKFSDFALHPKVIEALENKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT
MAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAQATGLKLGLAYG
GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR
WLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSN
EEKMRLLQTLIEEEWPDRAIIFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILE
EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA
CEEYALNLPAIETYIGHSIPQSKYNPEALLSELPPPKRLTRPRSGNGPRRSGGAPRNRRR
SG
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacacatttaacagaacagaagttttccgacttcgcgctgcacccgaaggtg
attgaagcccttgaaaataaagggtttcataactgcacgcccattcaggccctcgcgctg
ccgctgacgctggccggtcgcgatgttgccgggcaggcgcaaaccggtaccggcaaaacg
atggcgtttttaacgtcaacgtttcattatttactttctcacccagcgattgcagaccgc
aaagttaaccagccgcgcgcgctaattatggccccgacgcgagaactggcggtacagatc
catgcagacgctgaacccctggcgcaggctaccggccttaagcttggactggcctatggc
ggcgacggctacgataaacagctgaaagtgctggaaagcggtgtggatatcctgatcggt
accaccggccgtcttatcgactacgctaaacagaaccacattaacctcggtgcaatccag
gttgtggtgctcgatgaagctgaccgcatgtacgatctgggcttcattaaagacatccgc
tggctgttccgccgtatgcctccggccaatcagcgcctgaatatgctgttctctgcaacc
ctctcctaccgtgtgcgcgaactggcgttcgaacagatgaacaacgccgaatacgtggaa
gtggaaccggagcagaaaacgggtcaccgcattaaagaagagctcttctatccttccaat
gaagagaaaatgcgtctgctgcaaacgctgatcgaagaagaatggcccgatcgcgccatt
atcttcgcgaacaccaaacaccgttgtgaagacatctggggccatctggctgcagacggt
caccgtgttggcctgctgaccggcgacgtggcgcagaaaaaacgcctgcgcattcttgaa
gaatttacccgtggcgatctcgatattctggtcgcaaccgacgtggcggcacgtggttta
cacattccggccgtgacgcacgtctttaactacgatctgccagacgactgcgaagactac
gtacaccgtatcggtcgtaccggtcgtgcgggcgcaagcggtcactcgattagccttgcg
tgtgaagagtatgcgctgaatcttccagccattgagacttatatcggtcactctattccg
cagagcaaatacaatccggaagcgctgttaagcgaactgccgccgcctaagcgtctaacc
cgcccacgctccggcaatggtccgcgtcgttcaggcggcgcaccgcgtaatcgtcgtcgt
tcaggttaa
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