Erwinia pyrifoliae Ep1/96: EpC_02110
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Entry
EpC_02110 CDS
T01000
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
epy
Erwinia pyrifoliae Ep1/96
Pathway
epy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
epy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EpC_02110 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
epy03019
]
EpC_02110 (recQ)
03400 DNA repair and recombination proteins [BR:
epy03400
]
EpC_02110 (recQ)
Enzymes [BR:
epy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EpC_02110 (recQ)
Messenger RNA biogenesis [BR:
epy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EpC_02110 (recQ)
DNA repair and recombination proteins [BR:
epy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EpC_02110 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
DUF2846
Motif
Other DBs
NCBI-ProteinID:
CAX53969
LinkDB
All DBs
Position
243961..245793
Genome browser
AA seq
610 aa
AA seq
DB search
MSTAAVINNEALAGQVLRDTFGYQQFRPGQQTIIQESLNGRDCLVVMPTGGGKSLCYQIP
ALVRQGLTLVVSPLISLMKDQVDQLLANGVAAACLNSTQNREEQQNVMAGCRSGTVRLLY
IAPERLMMDNFLEQLTHCNPAMLAVDEAHCISQWGHDFRPEYGALGQLRQRLPDVPVMAL
TATADETTRNDIARLLQLNDPLIQISSFDRPNIRYTLVEKFKPTEQLLRYVQDQRGKCGI
IYCNSRAKVEDTAARLQSRGLSVGAYHAGMDNAHRAHVQEAFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEALLLYDPADMAWLRRCLEEKTQGPL
QDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQQACDNCDICLDPPRRYDGLLEAQKAL
SCIYRVGQRFGMGYIVEILRGANNQRIRDMQHDKLPVYGIGRDLSHEHWTSVLRQLIHLG
LVTQNIAMYSALQLTEAARPVLRGDVSLLLAVPRLVSVKTRSSSQKSFGGNYDRKLFAKL
RKLRKAIADEDNLPPYVVFNDATLIEMAEQMPITASEMLSVNGVGHKKLERFGKPFLLMI
KEHIDGGDEE
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
gtgtctacggcagcagtcatcaataacgaagcgctggcaggccaggtattgcgtgatacc
ttcggctatcagcagtttcgaccgggacaacaaaccatcattcaggaatcgctgaacggg
cgtgactgtctggtggtgatgccaaccggtgggggcaaatcgctctgctatcaaattccg
gcgctggtgcgtcaggggttgacgctggtggtgtcaccgctgatctcgctgatgaaggac
caggtcgatcagctgctggccaacggggtggcagcggcctgccttaattcgacgcaaaat
cgagaagaacagcaaaatgtcatggctggctgtcgcagcggaacagtgcgtttgctctac
attgcccctgaacgtctgatgatggacaacttccttgagcagctgacgcactgcaacccg
gcgatgctggccgtggatgaagcccattgtatctcgcagtggggccacgatttccgcccg
gaatatggcgctttgggccagctgcgtcaacggctgcctgacgtcccggtaatggcgtta
acggcgacagcggatgagaccacccgtaacgatattgcccgcctgttacaacttaatgac
ccactgattcagatcagcagcttcgaccggccgaatattcgctacacgctggtagaaaaa
tttaagccgaccgaacagctgctgcgctacgtccaggatcagcgcggcaagtgcggcatt
atttactgcaacagccgggcgaaagtcgaagataccgccgcccgcctgcaaagccgtggt
ttgagcgtgggggcttatcacgccggaatggataacgctcaccgcgctcatgtgcaggaa
gcatttcagcgcgacgacctgcaaattgtggtggcaacggtggcattcgggatgggcatc
aacaagcccaacgtgcgttttgtggttcatttcgacattccgcgtaatatcgagtcctac
tatcaggaaaccgggcgcgccgggcgcgatggcctgcctgctgaagccctgctgctgtac
gatccggccgatatggcctggctgcgccgctgcctggaagaaaaaacacaggggccgctg
caggatattgaacgccataagctgaatgcgatgggcgcctttgccgaggcgcagacctgc
cgccgcctggtgctgctgaactatttcggcgaaggacgtcagcaggcttgcgataactgc
gatatttgcctcgatccaccgcgccgctacgacggcctgctcgaagcgcaaaaagcgctt
tcctgcatctatcgcgtgggtcagcgctttggcatggggtatatcgttgagatcctgcgc
ggtgccaataatcagcgtattcgagatatgcagcacgataagctgccggtgtacggaata
ggtcgcgatctcagccatgaacactggaccagcgtgctgcgccagctgatccacctcggt
ttggtgacgcagaatattgctatgtactcggcactgcagttaaccgaagcggctcgtccg
gtgctgcgtggtgacgtctccctgttgctggccgtgccgcgcctggtgagcgtgaaaaca
cgcagcagcagccagaaatccttcggcggcaattacgatcgcaagctgtttgccaaattg
cgcaaactgcgcaaggcgattgctgatgaggataatcttccgccgtacgtggtattcaac
gacgcaacgctgattgaaatggcagagcagatgccgatcaccgcgtcagaaatgctgagt
gttaacggcgtcgggcacaaaaagctggagcgctttggcaagccgttcctgttgatgatt
aaagaacatatcgacggcggtgacgaagagtaa
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