Erwinia pyrifoliae Ep1/96: EpC_04780
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Entry
EpC_04780 CDS
T01000
Symbol
groL
Name
(GenBank) 60 kDa chaperonin (Protein Cpn60)
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
epy
Erwinia pyrifoliae Ep1/96
Pathway
epy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
epy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EpC_04780 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
epy03019
]
EpC_04780 (groL)
03110 Chaperones and folding catalysts [BR:
epy03110
]
EpC_04780 (groL)
03029 Mitochondrial biogenesis [BR:
epy03029
]
EpC_04780 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
epy04147
]
EpC_04780 (groL)
Enzymes [BR:
epy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
EpC_04780 (groL)
Messenger RNA biogenesis [BR:
epy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
EpC_04780 (groL)
Chaperones and folding catalysts [BR:
epy03110
]
Heat shock proteins
HSP60 / Chaperonin
EpC_04780 (groL)
Mitochondrial biogenesis [BR:
epy03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
EpC_04780 (groL)
Exosome [BR:
epy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
EpC_04780 (groL)
Exosomal proteins of other body fluids (saliva and urine)
EpC_04780 (groL)
Exosomal proteins of breast cancer cells
EpC_04780 (groL)
Exosomal proteins of colorectal cancer cells
EpC_04780 (groL)
Exosomal proteins of bladder cancer cells
EpC_04780 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
CAX54236
LinkDB
All DBs
Position
565709..567358
Genome browser
AA seq
549 aa
AA seq
DB search
MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGSPTITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIVNEGLKAVAAGMNPMDLKRGI
DKAVIAAVEELKKLSVPCSDSKAIAQVGTISANSDETVGELIAQAMEKVGKEGVITVEEG
TGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAV
AKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIAVLTGGTV
ISEEIGMELEKAALEDMGQAKRVVINKDTTTIIDGTGEEVAISGRVTQIRQQIEEATSDY
DREKLQERVAKLAGGVAVLKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALV
RVAAVLADLRGQNEDQNVGIKVALRAMESPLRQIVSNAGEEPSVVTNAVKAGEGNYGYNA
QTEEYGNMIDFGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKGDAPDLGAGGGGMG
GMGGMGGMM
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgtaaaattcggtaatgacgctcgcgtaaaaatgctgcgcggtgtg
aacgtactggcagatgcagtgaaagtgaccctcggcccgaaaggccgtaacgtggtgctg
gataaatctttcggctcaccaactattacgaaagatggtgtttccgtcgcgcgtgaaatc
gaactggaagacaagttcgaaaacatgggcgcgcagatggtgaaagaagtcgcttctaaa
gctaacgatgcagccggtgacggcaccaccaccgctaccgtactggctcagtccatcgtg
aacgaaggtctgaaagccgttgcggcgggcatgaatccaatggacctgaagcgcggcatc
gacaaagcggttatcgctgcggttgaagagctgaaaaaactgtccgtgccttgctctgac
tctaaagctatcgctcaggtaggtactatctctgccaactccgatgaaaccgtgggcgaa
ctgattgctcaggcgatggaaaaagtgggcaaagaaggcgttatcaccgttgaagaaggc
accggcctgcaggacgagctggatgtggttgaaggtatgcagtttgatcgcggctacctg
tctccttacttcatcaacaagccagaaaccggtgcggtagagctggaatcaccatttatc
ctgctggctgacaaaaaaatctccaacatccgcgaaatgctgccagtactggaagcggtt
gctaaagccggtaaaccactgctgatcatcgcggaagatgtggaaggcgaagcgctggct
actctggtggtgaacaccatgcgtggcatcgtgaaagtggctgcggttaaagcacctggc
tttggcgaccgccgtaaagccatgctgcaggatatcgccgtgctgaccggtggtaccgta
atctctgaagagatcggtatggagctggaaaaagcggctctggaagatatgggccaggca
aaacgcgttgttatcaacaaagacaccaccaccatcatcgatggcaccggcgaagaagtg
gctatctctggccgcgtgactcagatccgccagcagatcgaagaagcgacgtctgattac
gaccgtgaaaaactgcaggagcgcgtagcaaaactggcaggcggcgtagccgtgctgaaa
gtgggcgcagcaactgaagttgaaatgaaagagaaaaaagcacgcgttgaagatgccctg
cacgcgacccgtgctgcggttgaagaaggcgtggttgctggtggtggcgtggcgctggtt
cgcgttgcggcagtgctcgctgacctgcgtggtcagaacgaagaccagaacgtgggtatc
aaagttgccctgcgtgcgatggaatctccactgcgtcagatcgtttctaacgccggtgaa
gaaccatctgtggtgaccaatgccgtgaaagcgggtgaaggtaactacggctacaacgca
cagaccgaagagtacggcaacatgatcgatttcggtatccttgacccaactaaagtgacc
cgttctgctctgcagtacgcggcctctgttgctggcctgatgatcaccaccgaatgcatg
gtaaccgacctgcctaaaggcgatgcgcctgacttaggtgctggcggcggcggcatgggt
ggtatgggcggcatgggcggcatgatgtaa
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