Erwinia pyrifoliae Ep1/96: EpC_06110
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Entry
EpC_06110 CDS
T01000
Symbol
holD
Name
(GenBank) DNA polymerase III, psi subunit
KO
K02344
DNA polymerase III subunit psi [EC:
2.7.7.7
]
Organism
epy
Erwinia pyrifoliae Ep1/96
Pathway
epy03030
DNA replication
epy03430
Mismatch repair
epy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
epy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EpC_06110 (holD)
03430 Mismatch repair
EpC_06110 (holD)
03440 Homologous recombination
EpC_06110 (holD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
epy03032
]
EpC_06110 (holD)
03400 DNA repair and recombination proteins [BR:
epy03400
]
EpC_06110 (holD)
Enzymes [BR:
epy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EpC_06110 (holD)
DNA replication proteins [BR:
epy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EpC_06110 (holD)
DNA repair and recombination proteins [BR:
epy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EpC_06110 (holD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_III_psi
Motif
Other DBs
NCBI-ProteinID:
CAX54390
LinkDB
All DBs
Position
709778..710197
Genome browser
AA seq
139 aa
AA seq
DB search
MSPRRDWFLQQMGITQYTLRRPRALQGEIAITLPAETRLVIVADNPPMLHDPLVADVLRA
LNLHQPQVQVLTPDQLAMLPDDACCPSWRLGLEAPVTLAGTQIASPVLAELYHNAEAKRS
LWQQICQHESDFFTHSARP
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
atgtctcccagacgtgactggttcttacagcaaatggggattacgcagtatacgctgcgg
cgtccgcgcgccttgcagggcgagatcgcgataacgttacccgctgaaacccgcctggtg
atcgtggcggataatccgcccatgctgcacgacccgctggtggcggacgttttacgcgcc
ctgaatctgcatcaaccgcaggtgcaggtacttaccccagaccagctggcgatgctgccg
gatgatgcctgctgtcccagttggcgtttagggctggaagccccggtgacattagccgga
acccaaattgcttcgcccgtactggcggagctttatcataatgccgaggccaaacggtcg
ctctggcagcaaatttgccaacatgaatcagatttctttactcactctgcacgaccttga
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