Erwinia pyrifoliae Ep1/96: EpC_16110
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Entry
EpC_16110 CDS
T01000
Symbol
fadD
Name
(GenBank) Long chain fatty acid CoA-ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
epy
Erwinia pyrifoliae Ep1/96
Pathway
epy00061
Fatty acid biosynthesis
epy00071
Fatty acid degradation
epy01100
Metabolic pathways
epy01212
Fatty acid metabolism
epy02024
Quorum sensing
epy04146
Peroxisome
Module
epy_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
epy00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
EpC_16110 (fadD)
00071 Fatty acid degradation
EpC_16110 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
EpC_16110 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
EpC_16110 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
epy01004
]
EpC_16110 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
epy04147
]
EpC_16110 (fadD)
Enzymes [BR:
epy01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
EpC_16110 (fadD)
Lipid biosynthesis proteins [BR:
epy01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
EpC_16110 (fadD)
Exosome [BR:
epy04147
]
Exosomal proteins
Exosomal proteins of breast milk
EpC_16110 (fadD)
Exosomal proteins of breast cancer cells
EpC_16110 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
DUF4235
Motif
Other DBs
NCBI-ProteinID:
CAX55390
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All DBs
Position
1832223..1833941
Genome browser
AA seq
572 aa
AA seq
DB search
MTSNIKFRGNSLHKVWLNRYPVDVPAEINPDRYGSLIDLFEHAALRYARQTAFINMGQSL
SFSHLDTLSRSFAAYLQQGLGLQKGDRVALMMPNLLQYPIALFGILRAGMVVVNVNPLYT
PRELEHQLKDSGASAIVILTNFAHTLERVMANSGVKHVILTSPGDQLSAAKGALVNFVVK
YIKKMVPTYHLPGAVSFRQALRSGARMEYAKPHIVNDDLAFLQYTGGTTGVAKGAMLTHR
NMQANLEQTKATYGSLLKAGEETVVTALPLYHIFALTVNCLLFMELGGANLLITNPRDIP
ALVKELGRYPFTAITGVNTLFNALLNDAAFNRLDFSSLNLSAGGGMAVQKTVAERWEKLT
GHYLLEGYGLTECSPLVSVNPYDIQHHNGSIGLPVPSTDIMLVDDAGNETAAGEPGELCI
KGPQVMSGYWQRQQDTEEVLKNGWLRSGDIVTVDEEGFLRIVDRKKDMILVSGFNVYPNE
IEDVLMLHPKVGEAAAIGVPDDVAGETVKICVVKKDASLTADELIAHCRNYLTGYKVPKI
VEFRNQLPKTNVGKILRRQLREEVTSMTQQSR
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccaatatcaaattccgaggcaactctttgcataaggtttggttaaaccgatac
cccgtcgatgtaccggcagagattaatcccgatcgttacggctcgcttatcgacctgttt
gaacatgccgcactgcgttacgccaggcaaacggcgtttatcaatatggggcagagcctc
tctttcagccatttagacacgcttagccgttcatttgcggcctacctgcaacaggggttg
ggtttgcagaaaggcgatcgggtggcactgatgatgcccaatctactgcaatatccgatc
gccctgttcggtatactgcgcgccgggatggtcgtggtaaacgtcaacccgctatatacc
ccacgagaactcgaacatcagctgaaggatagcggtgccagcgccattgttatcttaacc
aattttgcccatacgctggaaagagtaatggccaacagcggggtaaagcacgttatcctt
accagccctggcgaccaactttcagccgcaaaaggggcgctggtcaactttgtggttaag
tatataaaaaaaatggtgccgacttatcatctgcccggggcggtctcttttcgccaggcg
ctgcgaagtggcgcacggatggaatacgccaaaccgcacattgttaatgacgatttggca
tttttgcaatataccggcggtactactggcgtggccaaaggggcgatgctgacccatcgc
aatatgcaggctaatcttgagcagaccaaagcgacctacggttcactgctgaaagcgggt
gaagagaccgtagtaacggcattgccgctttaccatatctttgcccttacggtgaactgt
ttgttgtttatggagctgggcggagccaacctgctgataacaaacccacgcgatattccg
gctttggtcaaagagctgggcagatatccgttcacggcaattaccggtgtcaacaccctg
tttaacgcgctactgaatgatgcggcatttaatcggctggatttctcctcgcttaacctg
tcagcaggcggcggtatggccgtacaaaaaacggttgccgagcgttgggagaaactcacc
gggcactatctgctggagggctatgggctaacggagtgttcgccgctggtatcggtcaac
ccttatgatattcagcaccacaatggcagcattggtttacccgtgccctctaccgatatt
atgctggtcgatgacgccggaaacgaaacggccgctggagaaccaggcgagctgtgcatc
aaagggcctcaggtcatgtcaggatactggcagcgccagcaggataccgaagaagtatta
aaaaatggatggcttcgcagcggtgatattgttaccgttgatgaggaaggtttcctgcgt
attgtcgatcgtaaaaaagatatgattctggtctccgggtttaacgtctacccgaatgaa
attgaagatgtgttgatgctgcatcctaaagtgggtgaagcggcagccattggcgtgccg
gatgatgtcgccggtgaaacggtgaaaatctgcgtagtgaagaaagatgcttcactgacc
gcagatgaattgattgcccactgtagaaattatctgacaggctacaaagttcccaaaatt
gttgaattccgcaatcagctgccaaagaccaacgtgggtaaaatcttgcgacgccaactg
cgcgaggaagtcaccagtatgacgcagcagtcacgctga
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